Lineage for Species: Vicugna pacos [TaxId: 30538]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2347168Protein automated matches [190119] (20 species)
    not a true protein
  7. 2348290Species Vicugna pacos [TaxId:30538] [189756] (42 PDB entries)

PDB entries in Species: Vicugna pacos [TaxId: 30538]:

  1. Domain(s) for 2xt1:
  2. Domain(s) for 2xv6:
    1. 2348298Domain d2xv6b1: 2xv6 B:0-112 [170417]
      Other proteins in same PDB: d2xv6a_, d2xv6b2, d2xv6c_, d2xv6d2
      automated match to d2p42b1
    2. 2348299Domain d2xv6d1: 2xv6 D:1-112 [192801]
      Other proteins in same PDB: d2xv6a_, d2xv6b2, d2xv6c_, d2xv6d2
      automated match to d1ieha_
  3. Domain(s) for 2xxc:
  4. Domain(s) for 2xxm:
  5. Domain(s) for 4jvp:
    1. 2348303Domain d4jvpa1: 4jvp A:1-127 [196921]
      Other proteins in same PDB: d4jvpa2, d4jvpb2
      automated match to d1jtpb_
      complexed with so4
    2. 2348304Domain d4jvpb1: 4jvp B:3-127 [202808]
      Other proteins in same PDB: d4jvpa2, d4jvpb2
      automated match to d4jvpa_
      complexed with so4
  6. Domain(s) for 4lgp:
    1. 2348335Domain d4lgpb_: 4lgp B: [331108]
      Other proteins in same PDB: d4lgpa_, d4lgpc_
      automated match to d4y7ma_
      complexed with cl, edo
    2. 2348336Domain d4lgpd_: 4lgp D: [331222]
      Other proteins in same PDB: d4lgpa_, d4lgpc_
      automated match to d4y7ma_
      complexed with cl, edo
  7. Domain(s) for 4lgr:
  8. Domain(s) for 4lgs:
  9. Domain(s) for 4lhj:
  10. Domain(s) for 4lhq:
    1. 2348333Domain d4lhqb_: 4lhq B: [331168]
      Other proteins in same PDB: d4lhqa_, d4lhqc_
      automated match to d4ocmc_
    2. 2348334Domain d4lhqd_: 4lhq D: [331329]
      Other proteins in same PDB: d4lhqa_, d4lhqc_
      automated match to d4ocmc_
  11. Domain(s) for 4tvs:
    1. 2348296Domain d4tvsa1: 4tvs a:1-127 [260054]
      Other proteins in same PDB: d4tvsa2, d4tvsb2
      automated match to d4heme_
      complexed with gol, so4
    2. 2348297Domain d4tvsb1: 4tvs b:1-127 [259542]
      Other proteins in same PDB: d4tvsa2, d4tvsb2
      automated match to d4heme_
      complexed with gol, so4
  12. Domain(s) for 4x7c:
    1. 2348319Domain d4x7cc1: 4x7c C:1-118 [270117]
      Other proteins in same PDB: d4x7cc2, d4x7cd2
      automated match to d4b50a_
    2. 2348320Domain d4x7cd1: 4x7c D:1-119 [270118]
      Other proteins in same PDB: d4x7cc2, d4x7cd2
      automated match to d4b50a_
  13. Domain(s) for 4x7e:
    1. 2348312Domain d4x7ec1: 4x7e C:1-119 [309966]
      Other proteins in same PDB: d4x7ec2, d4x7ed2
      automated match to d4x7dd_
      complexed with act, edo
    2. 2348313Domain d4x7ed1: 4x7e D:1-119 [309968]
      Other proteins in same PDB: d4x7ec2, d4x7ed2
      automated match to d4x7dd_
      complexed with act, edo
  14. Domain(s) for 4x7f:
    1. 2348300Domain d4x7fc1: 4x7f C:1-112 [309970]
      Other proteins in same PDB: d4x7fc2, d4x7fd2
      automated match to d4x7dd_
      complexed with edo, imd, na, po4
    2. 2348301Domain d4x7fd1: 4x7f D:1-111 [309972]
      Other proteins in same PDB: d4x7fc2, d4x7fd2
      automated match to d4x7dd_
      complexed with edo, imd, na, po4
  15. Domain(s) for 4xt1:
  16. Domain(s) for 4z9k:
  17. Domain(s) for 5boz:
    1. 2348358Domain d5bozg_: 5boz G: [326908]
      Other proteins in same PDB: d5boza_, d5bozb_, d5bozc_, d5bozd_, d5boze_, d5bozf_
      automated match to d4u7sa_
      complexed with cl, so4
    2. 2348359Domain d5bozh_: 5boz H: [326897]
      Other proteins in same PDB: d5boza_, d5bozb_, d5bozc_, d5bozd_, d5boze_, d5bozf_
      automated match to d4u7sa_
      complexed with cl, so4
    3. 2348360Domain d5bozi_: 5boz I: [327007]
      Other proteins in same PDB: d5boza_, d5bozb_, d5bozc_, d5bozd_, d5boze_, d5bozf_
      automated match to d4u7sa_
      complexed with cl, so4
    4. 2348361Domain d5bozj_: 5boz J: [326914]
      Other proteins in same PDB: d5boza_, d5bozb_, d5bozc_, d5bozd_, d5boze_, d5bozf_
      automated match to d4u7sa_
      complexed with cl, so4
    5. 2348362Domain d5bozk_: 5boz K: [326997]
      Other proteins in same PDB: d5boza_, d5bozb_, d5bozc_, d5bozd_, d5boze_, d5bozf_
      automated match to d4u7sa_
      complexed with cl, so4
    6. 2348363Domain d5bozl_: 5boz L: [326858]
      Other proteins in same PDB: d5boza_, d5bozb_, d5bozc_, d5bozd_, d5boze_, d5bozf_
      automated match to d4u7sa_
      complexed with cl, so4
  18. Domain(s) for 5e0q:
  19. Domain(s) for 5e1h:
  20. Domain(s) for 5f7n:
    1. 2348326Domain d5f7nc1: 5f7n C:3-114 [314170]
      Other proteins in same PDB: d5f7nc2, d5f7nd2
      automated match to d4ldeb_
      complexed with a2g, fuc, gal, nag
    2. 2348327Domain d5f7nd1: 5f7n D:3-114 [314172]
      Other proteins in same PDB: d5f7nc2, d5f7nd2
      automated match to d4ldeb_
      complexed with a2g, fuc, gal, nag
  21. Domain(s) for 5hgg:
    1. 2348315Domain d5hggs_: 5hgg S: [317995]
      Other proteins in same PDB: d5hgga_, d5hggb_, d5hggt2
      automated match to d2vyrh_
      complexed with gol, mes, so4, twn
    2. 2348316Domain d5hggt1: 5hgg T:6-127 [317980]
      Other proteins in same PDB: d5hgga_, d5hggb_, d5hggt2
      automated match to d2vyrh_
      complexed with gol, mes, so4, twn
  22. Domain(s) for 5hvf:
  23. Domain(s) for 5hvg:
    1. 2348356Domain d5hvgb1: 5hvg B:1-121 [318794]
      Other proteins in same PDB: d5hvgb2, d5hvgd2
      automated match to d4ldeb_
      complexed with act, bma, man, nag, zn
    2. 2348357Domain d5hvgd1: 5hvg D:6-120 [318786]
      Other proteins in same PDB: d5hvgb2, d5hvgd2
      automated match to d4ldeb_
      complexed with act, bma, man, nag, zn
  24. Domain(s) for 5hvh:
    1. 2348354Domain d5hvhb1: 5hvh B:3-121 [318787]
      Other proteins in same PDB: d5hvhb2, d5hvhc2
      automated match to d4ldeb_
      complexed with nag, zn
    2. 2348355Domain d5hvhc1: 5hvh C:2-118 [318778]
      Other proteins in same PDB: d5hvhb2, d5hvhc2
      automated match to d4ldeb_
      complexed with nag, zn
  25. Domain(s) for 5ivo:
  26. Domain(s) for 5j1s:
  27. Domain(s) for 5j1t:
  28. Domain(s) for 5j56:
  29. Domain(s) for 5j57:
  30. Domain(s) for 5l21:
  31. Domain(s) for 5lhr:
  32. Domain(s) for 5m30:
    1. 2348348Domain d5m30d1: 5m30 D:1-118 [335721]
      Other proteins in same PDB: d5m30d2, d5m30e2, d5m30f2
      automated match to d4ldeb_
    2. 2348349Domain d5m30e1: 5m30 E:1-118 [335664]
      Other proteins in same PDB: d5m30d2, d5m30e2, d5m30f2
      automated match to d4ldeb_
    3. 2348350Domain d5m30f1: 5m30 F:1-118 [335744]
      Other proteins in same PDB: d5m30d2, d5m30e2, d5m30f2
      automated match to d4ldeb_
  33. Domain(s) for 5nbl:
    1. 3056417Domain d5nblf_: 5nbl F: [356479]
      Other proteins in same PDB: d5nblc1, d5nblc2, d5nbld1, d5nbld2
      automated match to d1mqkh_
      complexed with atp, ca
    2. 3056433Domain d5nble_: 5nbl E: [356495]
      Other proteins in same PDB: d5nblc1, d5nblc2, d5nbld1, d5nbld2
      automated match to d1mqkh_
      complexed with atp, ca
  34. Domain(s) for 5o02:
  35. Domain(s) for 5o04:
    1. 2348328Domain d5o04c1: 5o04 C:1-119 [339813]
      Other proteins in same PDB: d5o04c2, d5o04d2, d5o04e2, d5o04f2
      automated match to d4xt1c_
      complexed with edo
    2. 2348329Domain d5o04d1: 5o04 D:6-119 [339812]
      Other proteins in same PDB: d5o04c2, d5o04d2, d5o04e2, d5o04f2
      automated match to d4xt1c_
      complexed with edo
    3. 2348330Domain d5o04e1: 5o04 E:6-114 [339821]
      Other proteins in same PDB: d5o04c2, d5o04d2, d5o04e2, d5o04f2
      automated match to d4ldeb_
      complexed with edo
    4. 2348331Domain d5o04f1: 5o04 F:6-111 [339832]
      Other proteins in same PDB: d5o04c2, d5o04d2, d5o04e2, d5o04f2
      automated match to d4ldeb_
      complexed with edo
  36. Domain(s) for 5o05:
    1. 2348317Domain d5o05c1: 5o05 C:6-118 [339819]
      Other proteins in same PDB: d5o05c2, d5o05d2
      automated match to d4ldeb_
      complexed with edo
    2. 2348318Domain d5o05d1: 5o05 D:6-118 [339808]
      Other proteins in same PDB: d5o05c2, d5o05d2
      automated match to d4ldeb_
      complexed with edo
  37. Domain(s) for 5o0w:
    1. 2348343Domain d5o0we1: 5o0w E:2-135 [339604]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
    2. 2348344Domain d5o0wf1: 5o0w F:2-135 [339590]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
    3. 2348345Domain d5o0wg1: 5o0w G:2-135 [339585]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
    4. 2348346Domain d5o0wh1: 5o0w H:2-135 [339606]
      Other proteins in same PDB: d5o0wa_, d5o0wb_, d5o0wc_, d5o0wd_, d5o0we2, d5o0wf2, d5o0wg2, d5o0wh2
      automated match to d4dkaa_
      complexed with gol
  38. Domain(s) for 5ocl:
    1. 2348322Domain d5ocla_: 5ocl A: [337291]
      automated match to d2p49b_
    2. 2348323Domain d5oclc_: 5ocl C: [337154]
      automated match to d2p49b_
    3. 2348324Domain d5oclf_: 5ocl F: [337254]
      automated match to d2p49b_
    4. 2348325Domain d5oclh_: 5ocl H: [337231]
      automated match to d2p49b_
  39. Domain(s) for 5omn:
  40. Domain(s) for 5u4m:
  41. Domain(s) for 5vxj:
    1. 2348337Domain d5vxjb_: 5vxj B: [338810]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    2. 2348338Domain d5vxjd_: 5vxj D: [338783]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    3. 2348339Domain d5vxjf_: 5vxj F: [338773]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    4. 2348340Domain d5vxjh_: 5vxj H: [338785]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
    5. 2348341Domain d5vxjj_: 5vxj J: [338792]
      Other proteins in same PDB: d5vxja_, d5vxjc_, d5vxje_, d5vxjg_, d5vxji_
      automated match to d1mqkh_
  42. Domain(s) for 6fe4:
    1. 3050579Domain d6fe4f1: 6fe4 F:6-117 [350641]
      Other proteins in same PDB: d6fe4a1, d6fe4a2, d6fe4b1, d6fe4b2, d6fe4c1, d6fe4c2, d6fe4d_, d6fe4e1, d6fe4e2, d6fe4f2, d6fe4g2, d6fe4h2, d6fe4i2, d6fe4j2
      automated match to d6eqib_
    2. 3050612Domain d6fe4g1: 6fe4 G:6-116 [350674]
      Other proteins in same PDB: d6fe4a1, d6fe4a2, d6fe4b1, d6fe4b2, d6fe4c1, d6fe4c2, d6fe4d_, d6fe4e1, d6fe4e2, d6fe4f2, d6fe4g2, d6fe4h2, d6fe4i2, d6fe4j2
      automated match to d6eqib_
    3. 3050616Domain d6fe4i1: 6fe4 I:6-119 [350678]
      Other proteins in same PDB: d6fe4a1, d6fe4a2, d6fe4b1, d6fe4b2, d6fe4c1, d6fe4c2, d6fe4d_, d6fe4e1, d6fe4e2, d6fe4f2, d6fe4g2, d6fe4h2, d6fe4i2, d6fe4j2
      automated match to d6eqib_
    4. 3050645Domain d6fe4h1: 6fe4 H:6-117 [350707]
      Other proteins in same PDB: d6fe4a1, d6fe4a2, d6fe4b1, d6fe4b2, d6fe4c1, d6fe4c2, d6fe4d_, d6fe4e1, d6fe4e2, d6fe4f2, d6fe4g2, d6fe4h2, d6fe4i2, d6fe4j2
      automated match to d6eqib_
    5. 3050702Domain d6fe4j1: 6fe4 J:6-116 [350764]
      Other proteins in same PDB: d6fe4a1, d6fe4a2, d6fe4b1, d6fe4b2, d6fe4c1, d6fe4c2, d6fe4d_, d6fe4e1, d6fe4e2, d6fe4f2, d6fe4g2, d6fe4h2, d6fe4i2, d6fe4j2
      automated match to d6eqib_

More info for Species Vicugna pacos [TaxId:30538] from b.1.1.1 automated matches

Timeline for Species Vicugna pacos [TaxId:30538] from b.1.1.1 automated matches: