Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1437613Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1437614Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1437785Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 1439158Protein automated matches [190144] (7 species)
    not a true protein
  7. 1439383Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (16 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]:

  1. Domain(s) for 3oeu:
    1. 1439388Domain d3oeub_: 3oeu B: [233083]
      Other proteins in same PDB: d3oeu1_, d3oeu2_, d3oeua_, d3oeuc_, d3oeue_, d3oeuf_, d3oeug_, d3oeuh_, d3oeui_, d3oeuj_, d3oeuk_, d3oeul_, d3oeum_, d3oeun_, d3oeuo_, d3oeuq_, d3oeus_, d3oeuu_, d3oeuv_, d3oeuw_, d3oeux_, d3oeuy_, d3oeuz_
      automated match to d1rypc_
      complexed with mes, mg, oeu
    2. 1439389Domain d3oeur_: 3oeu R: [191909]
      Other proteins in same PDB: d3oeu1_, d3oeu2_, d3oeua_, d3oeuc_, d3oeue_, d3oeuf_, d3oeug_, d3oeuh_, d3oeui_, d3oeuj_, d3oeuk_, d3oeul_, d3oeum_, d3oeun_, d3oeuo_, d3oeuq_, d3oeus_, d3oeuu_, d3oeuv_, d3oeuw_, d3oeux_, d3oeuy_, d3oeuz_
      automated match to d1jd2y_
      complexed with mes, mg, oeu
  2. Domain(s) for 3oev:
  3. Domain(s) for 3sdi:
    1. 1439396Domain d3sdid_: 3sdi D: [192062]
      Other proteins in same PDB: d3sdi1_, d3sdi2_, d3sdia_, d3sdic_, d3sdie_, d3sdig_, d3sdih_, d3sdii_, d3sdij_, d3sdik_, d3sdil_, d3sdim_, d3sdin_, d3sdio_, d3sdiq_, d3sdis_, d3sdiu_, d3sdiv_, d3sdiw_, d3sdix_, d3sdiy_, d3sdiz_
      automated match to d1jd2y_
      complexed with 3sd, mes, mg
    2. 1439397Domain d3sdir_: 3sdi R: [192065]
      Other proteins in same PDB: d3sdi1_, d3sdi2_, d3sdia_, d3sdic_, d3sdie_, d3sdig_, d3sdih_, d3sdii_, d3sdij_, d3sdik_, d3sdil_, d3sdim_, d3sdin_, d3sdio_, d3sdiq_, d3sdis_, d3sdiu_, d3sdiv_, d3sdiw_, d3sdix_, d3sdiy_, d3sdiz_
      automated match to d1jd2y_
      complexed with 3sd, mes, mg
  4. Domain(s) for 3sdk:
    1. 1439399Domain d3sdkd_: 3sdk D: [192068]
      Other proteins in same PDB: d3sdk1_, d3sdk2_, d3sdka_, d3sdkc_, d3sdke_, d3sdkg_, d3sdkh_, d3sdki_, d3sdkj_, d3sdkk_, d3sdkl_, d3sdkm_, d3sdkn_, d3sdko_, d3sdkq_, d3sdks_, d3sdku_, d3sdkv_, d3sdkw_, d3sdkx_, d3sdky_, d3sdkz_
      automated match to d1jd2y_
      complexed with mes, mg, p3n
    2. 1439400Domain d3sdkr_: 3sdk R: [192071]
      Other proteins in same PDB: d3sdk1_, d3sdk2_, d3sdka_, d3sdkc_, d3sdke_, d3sdkg_, d3sdkh_, d3sdki_, d3sdkj_, d3sdkk_, d3sdkl_, d3sdkm_, d3sdkn_, d3sdko_, d3sdkq_, d3sdks_, d3sdku_, d3sdkv_, d3sdkw_, d3sdkx_, d3sdky_, d3sdkz_
      automated match to d1jd2y_
      complexed with mes, mg, p3n
  5. Domain(s) for 3shj:
    1. 1439407Domain d3shjg_: 3shj G: [185385]
      Other proteins in same PDB: d3shj1_, d3shj2_, d3shja_, d3shjb_, d3shjc_, d3shjd_, d3shje_, d3shjf_, d3shjh_, d3shji_, d3shjj_, d3shjk_, d3shjl_, d3shjm_, d3shjn_, d3shjo_, d3shjp_, d3shjq_, d3shjr_, d3shjs_, d3shjt_, d3shjv_, d3shjw_, d3shjx_, d3shjy_, d3shjz_
      automated match to d1g65g_
      complexed with h10, mes
    2. 1439408Domain d3shju_: 3shj U: [185398]
      Other proteins in same PDB: d3shj1_, d3shj2_, d3shja_, d3shjb_, d3shjc_, d3shjd_, d3shje_, d3shjf_, d3shjh_, d3shji_, d3shjj_, d3shjk_, d3shjl_, d3shjm_, d3shjn_, d3shjo_, d3shjp_, d3shjq_, d3shjr_, d3shjs_, d3shjt_, d3shjv_, d3shjw_, d3shjx_, d3shjy_, d3shjz_
      automated match to d1g65g_
      complexed with h10, mes
  6. Domain(s) for 3tdd:
    1. 1439394Domain d3tddg_: 3tdd G: [185775]
      Other proteins in same PDB: d3tdd1_, d3tdd2_, d3tdda_, d3tddb_, d3tddc_, d3tddd_, d3tdde_, d3tddf_, d3tddh_, d3tddi_, d3tddj_, d3tddk_, d3tddl_, d3tddm_, d3tddn_, d3tddo_, d3tddp_, d3tddq_, d3tddr_, d3tdds_, d3tddt_, d3tddv_, d3tddw_, d3tddx_, d3tddy_, d3tddz_
      automated match to d1g65g_
      complexed with bfo
    2. 1439395Domain d3tddu_: 3tdd U: [185788]
      Other proteins in same PDB: d3tdd1_, d3tdd2_, d3tdda_, d3tddb_, d3tddc_, d3tddd_, d3tdde_, d3tddf_, d3tddh_, d3tddi_, d3tddj_, d3tddk_, d3tddl_, d3tddm_, d3tddn_, d3tddo_, d3tddp_, d3tddq_, d3tddr_, d3tdds_, d3tddt_, d3tddv_, d3tddw_, d3tddx_, d3tddy_, d3tddz_
      automated match to d1g65g_
      complexed with bfo
  7. Domain(s) for 3un8:
    1. 1439390Domain d3un8d_: 3un8 D: [192182]
      Other proteins in same PDB: d3un8a_, d3un8e_, d3un8i_, d3un8j_, d3un8k_, d3un8l_, d3un8m_, d3un8n_, d3un8o_, d3un8s_, d3un8w_, d3un8x_, d3un8y_, d3un8z_
      automated match to d1jd2y_
      complexed with 049
    2. 1439391Domain d3un8g_: 3un8 G: [192183]
      Other proteins in same PDB: d3un8a_, d3un8e_, d3un8i_, d3un8j_, d3un8k_, d3un8l_, d3un8m_, d3un8n_, d3un8o_, d3un8s_, d3un8w_, d3un8x_, d3un8y_, d3un8z_
      automated match to d1jd22_
      complexed with 049
    3. 1439392Domain d3un8r_: 3un8 R: [192185]
      Other proteins in same PDB: d3un8a_, d3un8e_, d3un8i_, d3un8j_, d3un8k_, d3un8l_, d3un8m_, d3un8n_, d3un8o_, d3un8s_, d3un8w_, d3un8x_, d3un8y_, d3un8z_
      automated match to d1jd2y_
      complexed with 049
    4. 1439393Domain d3un8u_: 3un8 U: [192186]
      Other proteins in same PDB: d3un8a_, d3un8e_, d3un8i_, d3un8j_, d3un8k_, d3un8l_, d3un8m_, d3un8n_, d3un8o_, d3un8s_, d3un8w_, d3un8x_, d3un8y_, d3un8z_
      automated match to d1jd22_
      complexed with 049
  8. Domain(s) for 4eu2:
    1. 1439386Domain d4eu2a_: 4eu2 A: [196947]
      Other proteins in same PDB: d4eu21_, d4eu22_, d4eu2b_, d4eu2c_, d4eu2d_, d4eu2e_, d4eu2f_, d4eu2g_, d4eu2h_, d4eu2i_, d4eu2j_, d4eu2k_, d4eu2l_, d4eu2m_, d4eu2n_, d4eu2p_, d4eu2q_, d4eu2r_, d4eu2s_, d4eu2t_, d4eu2u_, d4eu2v_, d4eu2w_, d4eu2x_, d4eu2y_, d4eu2z_
      automated match to d1rypa_
      complexed with wpi
    2. 1439387Domain d4eu2o_: 4eu2 O: [201965]
      Other proteins in same PDB: d4eu21_, d4eu22_, d4eu2b_, d4eu2c_, d4eu2d_, d4eu2e_, d4eu2f_, d4eu2g_, d4eu2h_, d4eu2i_, d4eu2j_, d4eu2k_, d4eu2l_, d4eu2m_, d4eu2n_, d4eu2p_, d4eu2q_, d4eu2r_, d4eu2s_, d4eu2t_, d4eu2u_, d4eu2v_, d4eu2w_, d4eu2x_, d4eu2y_, d4eu2z_
      automated match to d4eu2a_
      complexed with wpi
  9. Domain(s) for 4g4s:
    1. 1439384Domain d4g4sa_: 4g4s A: [192468]
      Other proteins in same PDB: d4g4sb_, d4g4sf_, d4g4sh_, d4g4sj_, d4g4sk_, d4g4sl_, d4g4sm_, d4g4sn_
      automated match to d1rypa_
      complexed with ldz, mg
    2. 1439385Domain d4g4se_: 4g4s E: [192469]
      Other proteins in same PDB: d4g4sb_, d4g4sf_, d4g4sh_, d4g4sj_, d4g4sk_, d4g4sl_, d4g4sm_, d4g4sn_
      automated match to d1rype_
      complexed with ldz, mg
  10. Domain(s) for 4jsq:
    1. 1439401Domain d4jsqg_: 4jsq G: [192967]
      Other proteins in same PDB: d4jsqa_, d4jsqe_, d4jsqi_, d4jsqj_, d4jsqk_, d4jsql_, d4jsqm_, d4jsqn_, d4jsqo_, d4jsqs_, d4jsqw_, d4jsqx_, d4jsqy_, d4jsqz_
      automated match to d1rypa_
      complexed with mes
    2. 1439402Domain d4jsqu_: 4jsq U: [192969]
      Other proteins in same PDB: d4jsqa_, d4jsqe_, d4jsqi_, d4jsqj_, d4jsqk_, d4jsql_, d4jsqm_, d4jsqn_, d4jsqo_, d4jsqs_, d4jsqw_, d4jsqx_, d4jsqy_, d4jsqz_
      automated match to d1rypa_
      complexed with mes
  11. Domain(s) for 4jsu:
    1. 1439403Domain d4jsug_: 4jsu G: [192971]
      Other proteins in same PDB: d4jsua_, d4jsue_, d4jsui_, d4jsuj_, d4jsuk_, d4jsul_, d4jsum_, d4jsun_, d4jsuo_, d4jsus_, d4jsuw_, d4jsux_, d4jsuy_, d4jsuz_
      automated match to d1rypa_
      complexed with mes
    2. 1439404Domain d4jsuu_: 4jsu U: [192974]
      Other proteins in same PDB: d4jsua_, d4jsue_, d4jsui_, d4jsuj_, d4jsuk_, d4jsul_, d4jsum_, d4jsun_, d4jsuo_, d4jsus_, d4jsuw_, d4jsux_, d4jsuy_, d4jsuz_
      automated match to d1rypa_
      complexed with mes
  12. Domain(s) for 4nnn:
  13. Domain(s) for 4nnw:
  14. Domain(s) for 4no1:
  15. Domain(s) for 4no8:
  16. Domain(s) for 4no9:

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] from d.153.1.4 automated matches

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] from d.153.1.4 automated matches: