Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1892544Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1892545Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1892546Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1893246Protein automated matches [190118] (9 species)
    not a true protein
  7. 1893271Species Human (Homo sapiens) [TaxId:9606] [189560] (79 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1wyw:
  2. Domain(s) for 1xqq:
  3. Domain(s) for 1y8r:
    1. 1893379Domain d1y8rc_: 1y8r C: [122761]
      automated match to d1a5r__
      complexed with atp, mg, zn
    2. 1893380Domain d1y8rf_: 1y8r F: [122762]
      automated match to d1a5r__
      complexed with atp, mg, zn
  4. Domain(s) for 1z5s:
  5. Domain(s) for 2awt:
  6. Domain(s) for 2bgf:
    1. 1893420Domain d2bgfa_: 2bgf A: [128476]
      automated match to d4auqc_
    2. 1893421Domain d2bgfb_: 2bgf B: [128477]
      automated match to d4auqc_
  7. Domain(s) for 2bkr:
  8. Domain(s) for 2c9w:
  9. Domain(s) for 2d07:
  10. Domain(s) for 2den:
  11. Domain(s) for 2g4d:
    1. 1893390Domain d2g4db_: 2g4d B: [134590]
      Other proteins in same PDB: d2g4da1, d2g4dc_
      automated match to d1y8rc_
      mutant
    2. 1893391Domain d2g4dd_: 2g4d D: [134591]
      Other proteins in same PDB: d2g4da1, d2g4dc_
      automated match to d1y8rc_
      mutant
  12. Domain(s) for 2gbj:
    1. 1893274Domain d2gbja_: 2gbj A: [164626]
      automated match to d1aara_
      mutant
    2. 1893275Domain d2gbjb_: 2gbj B: [164627]
      automated match to d1aara_
      mutant
  13. Domain(s) for 2gbk:
    1. 1893321Domain d2gbka_: 2gbk A: [164628]
      automated match to d1aara_
      mutant
    2. 1893322Domain d2gbkb_: 2gbk B: [164629]
      automated match to d1aara_
      mutant
    3. 1893323Domain d2gbkc_: 2gbk C: [164630]
      automated match to d1aara_
      mutant
    4. 1893324Domain d2gbkd_: 2gbk D: [164631]
      automated match to d1aara_
      mutant
  14. Domain(s) for 2gbm:
    1. 1893284Domain d2gbma_: 2gbm A: [164632]
      automated match to d1aara_
      complexed with ars; mutant
    2. 1893285Domain d2gbmb_: 2gbm B: [164633]
      automated match to d1aara_
      complexed with ars; mutant
    3. 1893286Domain d2gbmc_: 2gbm C: [164634]
      automated match to d1aara_
      complexed with ars; mutant
    4. 1893287Domain d2gbmd_: 2gbm D: [164635]
      automated match to d1aara_
      complexed with ars; mutant
  15. Domain(s) for 2gbn:
  16. Domain(s) for 2gbr:
    1. 1893318Domain d2gbra_: 2gbr A: [164637]
      automated match to d1aara_
      complexed with cd; mutant
    2. 1893319Domain d2gbrb_: 2gbr B: [164638]
      automated match to d1aara_
      complexed with cd; mutant
    3. 1893320Domain d2gbrc_: 2gbr C: [164639]
      automated match to d1aara_
      complexed with cd; mutant
  17. Domain(s) for 2io1:
    1. 1893354Domain d2io1b_: 2io1 B: [137537]
      Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
      automated match to d1wm2a_
    2. 1893355Domain d2io1d_: 2io1 D: [137538]
      Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
      automated match to d1wm2a_
    3. 1893356Domain d2io1f_: 2io1 F: [137539]
      Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
      automated match to d1wm2a_
  18. Domain(s) for 2izv:
  19. Domain(s) for 2jz3:
  20. Domain(s) for 2klg:
  21. Domain(s) for 2kx3:
  22. Domain(s) for 2l0t:
  23. Domain(s) for 2lgd:
  24. Domain(s) for 2lj5:
  25. Domain(s) for 2m0x:
  26. Domain(s) for 2m17:
  27. Domain(s) for 2mjb:
  28. Domain(s) for 2nr2:
  29. Domain(s) for 2o6v:
    1. 1893335Domain d2o6vb_: 2o6v B: [138923]
      Other proteins in same PDB: d2o6va_, d2o6vc_, d2o6vd1, d2o6ve_, d2o6vg_, d2o6vh_
      automated match to d1aara_
      complexed with mes, so4
    2. 1893336Domain d2o6vf_: 2o6v F: [138926]
      Other proteins in same PDB: d2o6va_, d2o6vc_, d2o6vd1, d2o6ve_, d2o6vg_, d2o6vh_
      automated match to d1aara_
      complexed with mes, so4
  30. Domain(s) for 2pe9:
    1. 1893413Domain d2pe9a_: 2pe9 A: [149399]
      automated match to d4auqc_
    2. 1893414Domain d2pe9b_: 2pe9 B: [149400]
      automated match to d4auqc_
  31. Domain(s) for 2pea:
    1. 1893415Domain d2peaa_: 2pea A: [149401]
      automated match to d4auqc_
    2. 1893416Domain d2peab_: 2pea B: [149402]
      automated match to d4auqc_
  32. Domain(s) for 2w9n:
    1. 1893350Domain d2w9na1: 2w9n A:1-76 [244066]
      automated match to d4auqc_
      complexed with cl, zn
    2. 1893351Domain d2w9na2: 2w9n A:77-149 [244067]
      automated match to d4auqc_
      complexed with cl, zn
  33. Domain(s) for 2wyq:
  34. Domain(s) for 2xk5:
    1. 1893392Domain d2xk5a_: 2xk5 A: [244533]
      automated match to d4auqc_
      complexed with zn
    2. 1893393Domain d2xk5b_: 2xk5 B: [244534]
      automated match to d4auqc_
      complexed with zn
  35. Domain(s) for 2y5b:
    1. 1893370Domain d2y5bb1: 2y5b B:1-73 [239020]
      Other proteins in same PDB: d2y5ba_, d2y5be_
      automated match to d3nobh_
      complexed with so4, zn
    2. 1893371Domain d2y5bb2: 2y5b B:76-152 [239021]
      Other proteins in same PDB: d2y5ba_, d2y5be_
      automated match to d3nobh_
      complexed with so4, zn
    3. 1893372Domain d2y5bf1: 2y5b F:1-75 [239022]
      Other proteins in same PDB: d2y5ba_, d2y5be_
      automated match to d3nobh_
      complexed with so4, zn
    4. 1893373Domain d2y5bf2: 2y5b F:76-152 [239023]
      Other proteins in same PDB: d2y5ba_, d2y5be_
      automated match to d3nobh_
      complexed with so4, zn
  36. Domain(s) for 2zcb:
    1. 1893290Domain d2zcba_: 2zcb A: [154336]
      automated match to d1aara_
      complexed with zn
    2. 1893291Domain d2zcbb_: 2zcb B: [161592]
      automated match to d1aara_
      complexed with zn
    3. 1893292Domain d2zcbc_: 2zcb C: [161593]
      automated match to d1aara_
      complexed with zn
  37. Domain(s) for 2zvn:
    1. 1893399Domain d2zvna1: 2zvn A:1-76 [244990]
      automated match to d4auqc_
    2. 1893400Domain d2zvna2: 2zvn A:77-148 [244991]
      automated match to d4auqc_
    3. 1893401Domain d2zvnc1: 2zvn C:0-76 [244992]
      automated match to d4auqc_
    4. 1893402Domain d2zvnc2: 2zvn C:77-148 [244993]
      automated match to d4auqc_
    5. 1893403Domain d2zvne1: 2zvn E:1-76 [244994]
      automated match to d4auqc_
    6. 1893404Domain d2zvne2: 2zvn E:77-146 [244995]
      automated match to d4auqc_
    7. 1893405Domain d2zvng1: 2zvn G:1-76 [244996]
      automated match to d4auqc_
    8. 1893406Domain d2zvng2: 2zvn G:77-146 [244997]
      automated match to d4auqc_
  38. Domain(s) for 2zvo:
    1. 1893394Domain d2zvoa1: 2zvo A:0-76 [244998]
      automated match to d4auqc_
    2. 1893395Domain d2zvoa2: 2zvo A:77-148 [244999]
      automated match to d4auqc_
    3. 1893396Domain d2zvog1: 2zvo G:1-76 [245000]
      automated match to d4auqc_
    4. 1893397Domain d2zvog2: 2zvo G:77-146 [245001]
      automated match to d4auqc_
  39. Domain(s) for 3jsv:
  40. Domain(s) for 3k9p:
  41. Domain(s) for 3nob:
    1. 1893357Domain d3noba_: 3nob A: [182440]
      automated match to d1aara_
      complexed with so4
    2. 1893358Domain d3nobb_: 3nob B: [182441]
      automated match to d1aara_
      complexed with so4
    3. 1893359Domain d3nobc_: 3nob C: [182442]
      automated match to d1aara_
      complexed with so4
    4. 1893360Domain d3nobd_: 3nob D: [182443]
      automated match to d1aara_
      complexed with so4
    5. 1893361Domain d3nobe_: 3nob E: [182444]
      automated match to d1aara_
      complexed with so4
    6. 1893362Domain d3nobf_: 3nob F: [182445]
      automated match to d1aara_
      complexed with so4
    7. 1893363Domain d3nobg_: 3nob G: [182446]
      automated match to d1aara_
      complexed with so4
    8. 1893364Domain d3nobh_: 3nob H: [182447]
      automated match to d1aara_
      complexed with so4
  42. Domain(s) for 3phd:
  43. Domain(s) for 3pse:
    1. 1893316Domain d3pseb1: 3pse B:4-78 [233268]
      automated match to d1z2ma1
      complexed with 3cn, gol
    2. 1893317Domain d3pseb2: 3pse B:79-156 [233269]
      automated match to d1z2ma2
      complexed with 3cn, gol
  44. Domain(s) for 3r66:
    1. 1893368Domain d3r66c2: 3r66 C:79-154 [233411]
      Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c1, d3r66d1
      automated match to d1z2ma2
    2. 1893369Domain d3r66d2: 3r66 D:79-154 [233412]
      Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c1, d3r66d1
      automated match to d1z2ma2
  45. Domain(s) for 3rt3:
    1. 1893307Domain d3rt3b1: 3rt3 B:3-78 [233498]
      Other proteins in same PDB: d3rt3c_
      automated match to d1z2ma1
      complexed with sin
    2. 1893308Domain d3rt3b2: 3rt3 B:79-155 [233499]
      Other proteins in same PDB: d3rt3c_
      automated match to d1z2ma2
      complexed with sin
  46. Domain(s) for 3rzw:
    1. 1893325Domain d3rzwc_: 3rzw C: [185230]
      Other proteins in same PDB: d3rzwa_, d3rzwb_
      automated match to d1a5ra_
      complexed with gol
    2. 1893326Domain d3rzwd_: 3rzw D: [185231]
      Other proteins in same PDB: d3rzwa_, d3rzwb_
      automated match to d1a5ra_
      complexed with gol
  47. Domain(s) for 3sdl:
    1. 1893337Domain d3sdlc2: 3sdl C:79-154 [239725]
      Other proteins in same PDB: d3sdla_, d3sdlb_, d3sdlc1, d3sdld1
      automated match to d3r66c2
    2. 1893338Domain d3sdld2: 3sdl D:79-154 [239727]
      Other proteins in same PDB: d3sdla_, d3sdlb_, d3sdlc1, d3sdld1
      automated match to d3r66c2
  48. Domain(s) for 3uin:
  49. Domain(s) for 3uio:
  50. Domain(s) for 3zkj:
    1. 1893366Domain d3zkjc_: 3zkj C: [201328]
      Other proteins in same PDB: d3zkjb_, d3zkje_
      complexed with cl, edo, peg
    2. 1893367Domain d3zkjf_: 3zkj F: [201330]
      Other proteins in same PDB: d3zkjb_, d3zkje_
      complexed with cl, edo, peg
  51. Domain(s) for 3znz:
    1. 1893300Domain d3znzb1: 3znz B:1-76 [250808]
      automated match to d4auqc_
      complexed with so4
    2. 1893301Domain d3znzb2: 3znz B:77-146 [250809]
      automated match to d4auqc_
      complexed with so4
  52. Domain(s) for 3zo5:
  53. Domain(s) for 4ap4:
    1. 1893330Domain d4ap4c_: 4ap4 C: [194912]
      Other proteins in same PDB: d4ap4b_, d4ap4e_
      automated match to d3nobh_
      complexed with zn
    2. 1893331Domain d4ap4f_: 4ap4 F: [194913]
      Other proteins in same PDB: d4ap4b_, d4ap4e_
      automated match to d3nobh_
      complexed with zn
  54. Domain(s) for 4auq:
    1. 1893332Domain d4auqc_: 4auq C: [194816]
      Other proteins in same PDB: d4auqa_, d4auqd_
      automated match to d3nheb_
      complexed with zn
    2. 1893333Domain d4auqf_: 4auq F: [194818]
      Other proteins in same PDB: d4auqa_, d4auqd_
      automated match to d3nheb_
      complexed with zn
  55. Domain(s) for 4b95:
  56. Domain(s) for 4bkg:
  57. Domain(s) for 4boz:
    1. 1893385Domain d4bozb_: 4boz B: [251292]
      automated match to d4auqc_
      complexed with gol
    2. 1893386Domain d4bozc_: 4boz C: [251293]
      automated match to d4auqc_
      complexed with gol
    3. 1893387Domain d4boze_: 4boz E: [251294]
      automated match to d4auqc_
      complexed with gol
  58. Domain(s) for 4dwf:
    1. 1893297Domain d4dwfa_: 4dwf A: [195743]
      automated match to d1wx9a1
      complexed with so4
    2. 1893298Domain d4dwfb_: 4dwf B: [201746]
      automated match to d4dwfa_
      complexed with so4
  59. Domain(s) for 4eew:
    1. 1893272Domain d4eewa_: 4eew A: [201835]
      automated match to d4eewb_
    2. 1893273Domain d4eewb_: 4eew B: [195625]
      automated match to d1wx9a1
  60. Domain(s) for 4hjk:
  61. Domain(s) for 4hk2:
    1. 1893276Domain d4hk2a_: 4hk2 A: [202442]
      automated match to d4hk2c_
      complexed with so4
    2. 1893277Domain d4hk2b_: 4hk2 B: [202443]
      automated match to d4hk2c_
      complexed with so4
    3. 1893278Domain d4hk2c_: 4hk2 C: [193362]
      automated match to d3nobh_
      complexed with so4
    4. 1893279Domain d4hk2d_: 4hk2 D: [202444]
      automated match to d4hk2c_
      complexed with so4
  62. Domain(s) for 4icu:
    1. 1893374Domain d4icua_: 4icu A: [256776]
      automated match to d1wjna_
    2. 1893375Domain d4icub_: 4icu B: [262716]
      automated match to d1wjna_
    3. 1893376Domain d4icuc_: 4icu C: [262717]
      automated match to d1wjna_
    4. 1893377Domain d4icud_: 4icu D: [262718]
      automated match to d1wjna_
  63. Domain(s) for 4icv:
  64. Domain(s) for 4msm:
    1. 1893305Domain d4msmb_: 4msm B: [266767]
      automated match to d3dbhi_
      complexed with edo, po4, zn; mutant
    2. 1893306Domain d4msmd_: 4msm D: [266768]
      automated match to d3dbhi_
      complexed with edo, po4, zn; mutant
  65. Domain(s) for 4msq:
    1. 1893327Domain d4msqb_: 4msq B: [266771]
      automated match to d3dbhi_
      complexed with edo, po4, zn
    2. 1893328Domain d4msqd_: 4msq D: [266772]
      automated match to d3dbhi_
      complexed with edo, po4, zn
  66. Domain(s) for 4pig:
    1. 1893310Domain d4piga_: 4pig A: [263493]
      automated match to d4pigd_
      complexed with ca, cl, na; mutant
    2. 1893311Domain d4pigb_: 4pig B: [263494]
      automated match to d4pigd_
      complexed with ca, cl, na; mutant
    3. 1893312Domain d4pigc_: 4pig C: [263495]
      automated match to d4pigd_
      complexed with ca, cl, na; mutant
    4. 1893313Domain d4pigd_: 4pig D: [260735]
      automated match to d4auqc_
      complexed with ca, cl, na; mutant
  67. Domain(s) for 4pih:
    1. 1893288Domain d4piha_: 4pih A: [260737]
      automated match to d4auqc_
      complexed with ca, cl; mutant
    2. 1893289Domain d4pihb_: 4pih B: [263496]
      automated match to d4piha_
      complexed with ca, cl; mutant
  68. Domain(s) for 4pij:
    1. 1893293Domain d4pija_: 4pij A: [260736]
      automated match to d3rula_
      complexed with gol, so4; mutant
    2. 1893294Domain d4pijb_: 4pij B: [263497]
      automated match to d4pija_
      complexed with gol, so4; mutant
  69. Domain(s) for 4pqt:
  70. Domain(s) for 4r62:
  71. Domain(s) for 4s1z:
    1. 1893408Domain d4s1za_: 4s1z A: [271239]
      automated match to d2murb_
      complexed with zn
    2. 1893409Domain d4s1zb_: 4s1z B: [271237]
      automated match to d2murb_
      complexed with zn
    3. 1893410Domain d4s1zc_: 4s1z C: [271238]
      automated match to d2murb_
      complexed with zn
    4. 1893411Domain d4s1zd_: 4s1z D: [271236]
      automated match to d2murb_
      complexed with zn
    5. 1893412Domain d4s1ze_: 4s1z E: [271235]
      automated match to d2murb_
      complexed with zn
  72. Domain(s) for 4v3k:
    1. 1893352Domain d4v3kb_: 4v3k B: [271276]
      Other proteins in same PDB: d4v3ka_, d4v3kd_
      automated match to d3dbhi_
      complexed with cl, edo, zn
    2. 1893353Domain d4v3ke_: 4v3k E: [271279]
      Other proteins in same PDB: d4v3ka_, d4v3kd_
      automated match to d3dbhi_
      complexed with cl, edo, zn
  73. Domain(s) for 4v3l:
    1. 1893303Domain d4v3lb_: 4v3l B: [271283]
      Other proteins in same PDB: d4v3la_
      automated match to d3dbhi_
      complexed with edo, zn
    2. 1893304Domain d4v3ld_: 4v3l D: [271284]
      Other proteins in same PDB: d4v3la_
      automated match to d3dbhi_
      complexed with edo, zn
  74. Domain(s) for 4wjn:
  75. Domain(s) for 4wjo:
  76. Domain(s) for 4zfr:
  77. Domain(s) for 4zft:
    1. 1893382Domain d4zftb_: 4zft B: [278248]
      automated match to d3dbhi_
      complexed with edo, zn; mutant
    2. 1893383Domain d4zftd_: 4zft D: [278251]
      automated match to d3dbhi_
      complexed with edo, zn; mutant
  78. Domain(s) for 5af4:
    1. 1893339Domain d5af4a_: 5af4 A: [270195]
      automated match to d2murb_
      complexed with gol, so4
    2. 1893340Domain d5af4b_: 5af4 B: [270190]
      automated match to d2murb_
      complexed with gol, so4
    3. 1893341Domain d5af4c_: 5af4 C: [270193]
      automated match to d2murb_
      complexed with gol, so4
    4. 1893342Domain d5af4d_: 5af4 D: [270198]
      automated match to d2murb_
      complexed with gol, so4
    5. 1893343Domain d5af4e_: 5af4 E: [270197]
      automated match to d2murb_
      complexed with gol, so4
    6. 1893344Domain d5af4f_: 5af4 F: [270192]
      automated match to d2murb_
      complexed with gol, so4
    7. 1893345Domain d5af4g_: 5af4 G: [270191]
      automated match to d2murb_
      complexed with gol, so4
    8. 1893346Domain d5af4h_: 5af4 H: [270194]
      automated match to d2murb_
      complexed with gol, so4
  79. Domain(s) for 5af5:

More info for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 automated matches: