Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2332674Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2332675Superfamily a.118.1: ARM repeat [48371] (27 families) (S)
  5. 2333294Family a.118.1.0: automated matches [191340] (1 protein)
    not a true family
  6. 2333295Protein automated matches [190220] (14 species)
    not a true protein
  7. 2333321Species Human (Homo sapiens) [TaxId:9606] [189070] (63 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2jdq:
    1. 2333326Domain d2jdqa_: 2jdq A: [230912]
      Other proteins in same PDB: d2jdqd_, d2jdqe_
      automated match to d3tj3a_
      protein/RNA complex
    2. 2333327Domain d2jdqb_: 2jdq B: [238701]
      Other proteins in same PDB: d2jdqd_, d2jdqe_
      automated match to d2jdqa_
      protein/RNA complex
  2. Domain(s) for 2xzg:
  3. Domain(s) for 2xzh:
  4. Domain(s) for 3dbs:
  5. Domain(s) for 3fey:
  6. Domain(s) for 3jui:
  7. Domain(s) for 3l6x:
  8. Domain(s) for 3l6y:
    1. 2333377Domain d3l6yc_: 3l6y C: [247362]
      automated match to d1xm9a1
    2. 2333378Domain d3l6ye_: 3l6y E: [247363]
      automated match to d1xm9a1
  9. Domain(s) for 3mdj:
    1. 2333371Domain d3mdja4: 3mdj A:615-934 [247647]
      Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja3, d3mdjb1, d3mdjb2, d3mdjb3, d3mdjc1, d3mdjc2, d3mdjc3
      automated match to d2yd0a4
      complexed with bes, bma, man, nag, zn
    2. 2333372Domain d3mdjb4: 3mdj B:615-934 [247651]
      Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja3, d3mdjb1, d3mdjb2, d3mdjb3, d3mdjc1, d3mdjc2, d3mdjc3
      automated match to d2yd0a4
      complexed with bes, bma, man, nag, zn
    3. 2333373Domain d3mdjc4: 3mdj C:615-934 [247655]
      Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja3, d3mdjb1, d3mdjb2, d3mdjb3, d3mdjc1, d3mdjc2, d3mdjc3
      automated match to d2yd0a4
      complexed with bes, bma, man, nag, zn
  10. Domain(s) for 3qnf:
    1. 2333346Domain d3qnfb4: 3qnf B:615-935 [248937]
      Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfa3, d3qnfb1, d3qnfb2, d3qnfb3, d3qnfc1, d3qnfc2, d3qnfc3
      automated match to d2yd0a4
      complexed with nag, zn
    2. 2333347Domain d3qnfc4: 3qnf C:615-937 [248941]
      Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfa3, d3qnfb1, d3qnfb2, d3qnfb3, d3qnfc1, d3qnfc2, d3qnfc3
      automated match to d2yd0a4
      complexed with nag, zn
  11. Domain(s) for 3se6:
    1. 2333354Domain d3se6a4: 3se6 A:638-960 [249388]
      Other proteins in same PDB: d3se6a1, d3se6a2, d3se6a3, d3se6a5, d3se6b1, d3se6b2, d3se6b3, d3se6b5
      automated match to d2yd0a4
      complexed with lys, mes, nag, zn
    2. 2333355Domain d3se6b4: 3se6 B:638-960 [249392]
      Other proteins in same PDB: d3se6a1, d3se6a2, d3se6a3, d3se6a5, d3se6b1, d3se6b2, d3se6b3, d3se6b5
      automated match to d2yd0a4
      complexed with lys, mes, nag, zn
  12. Domain(s) for 3tj3:
    1. 2333349Domain d3tj3a_: 3tj3 A: [216835]
      automated match to d1ee5a_
    2. 2333350Domain d3tj3b_: 3tj3 B: [216836]
      automated match to d1ee5a_
  13. Domain(s) for 3zvv:
  14. Domain(s) for 3zw3:
  15. Domain(s) for 4anu:
  16. Domain(s) for 4anv:
  17. Domain(s) for 4anw:
  18. Domain(s) for 4anx:
  19. Domain(s) for 4fyq:
  20. Domain(s) for 4fyr:
  21. Domain(s) for 4fyt:
  22. Domain(s) for 4g55:
  23. Domain(s) for 4hle:
  24. Domain(s) for 4j6i:
  25. Domain(s) for 4jbs:
    1. 2333366Domain d4jbsa4: 4jbs A:638-960 [252875]
      Other proteins in same PDB: d4jbsa1, d4jbsa2, d4jbsa3, d4jbsa5, d4jbsb1, d4jbsb2, d4jbsb3, d4jbsb5
      automated match to d2yd0a4
      complexed with imd, man, nag, p52, zn
    2. 2333367Domain d4jbsb4: 4jbs B:638-960 [252879]
      Other proteins in same PDB: d4jbsa1, d4jbsa2, d4jbsa3, d4jbsa5, d4jbsb1, d4jbsb2, d4jbsb3, d4jbsb5
      automated match to d2yd0a4
      complexed with imd, man, nag, p52, zn
  26. Domain(s) for 4p8q:
    1. 2333362Domain d4p8qa4: 4p8q A:707-1025 [261384]
      Other proteins in same PDB: d4p8qa1, d4p8qa2, d4p8qa3, d4p8qb1, d4p8qb2, d4p8qb3
      automated match to d3se6b4
      complexed with nag, unl, zn
    2. 2333363Domain d4p8qb4: 4p8q B:707-1025 [263459]
      Other proteins in same PDB: d4p8qa1, d4p8qa2, d4p8qa3, d4p8qb1, d4p8qb2, d4p8qb3
      automated match to d4p8qa4
      complexed with nag, unl, zn
  27. Domain(s) for 4pj6:
    1. 2333360Domain d4pj6a4: 4pj6 A:707-1025 [267177]
      Other proteins in same PDB: d4pj6a1, d4pj6a2, d4pj6a3, d4pj6b1, d4pj6b2, d4pj6b3
      automated match to d4p8qa4
      complexed with lys, nag, zn
    2. 2333361Domain d4pj6b4: 4pj6 B:707-1025 [267181]
      Other proteins in same PDB: d4pj6a1, d4pj6a2, d4pj6a3, d4pj6b1, d4pj6b2, d4pj6b3
      automated match to d4p8qa4
      complexed with lys, nag, zn
  28. Domain(s) for 4uad:
  29. Domain(s) for 4uae:
  30. Domain(s) for 4urk:
  31. Domain(s) for 5aen:
  32. Domain(s) for 5cu5:
    1. 2333379Domain d5cu5a4: 5cu5 A:638-960 [277109]
      Other proteins in same PDB: d5cu5a1, d5cu5a2, d5cu5a3, d5cu5a5, d5cu5b1, d5cu5b2, d5cu5b3, d5cu5b5
      automated match to d3se6a4
      complexed with man, nag
    2. 2333380Domain d5cu5b4: 5cu5 B:638-960 [277114]
      Other proteins in same PDB: d5cu5a1, d5cu5a2, d5cu5a3, d5cu5a5, d5cu5b1, d5cu5b2, d5cu5b3, d5cu5b5
      automated match to d3se6a4
      complexed with man, nag
  33. Domain(s) for 5fwq:
  34. Domain(s) for 5g2n:
  35. Domain(s) for 5g55:
  36. Domain(s) for 5j6s:
    1. 2333368Domain d5j6sa4: 5j6s A:638-960 [331034]
      Other proteins in same PDB: d5j6sa1, d5j6sa2, d5j6sa3, d5j6sa5, d5j6sb1, d5j6sb2, d5j6sb3, d5j6sb5
      automated match to d3se6a4
      complexed with 6ga, bma, man, nag, zn
    2. 2333369Domain d5j6sb4: 5j6s B:638-960 [331022]
      Other proteins in same PDB: d5j6sa1, d5j6sa2, d5j6sa3, d5j6sa5, d5j6sb1, d5j6sb2, d5j6sb3, d5j6sb5
      automated match to d3se6a4
      complexed with 6ga, bma, man, nag, zn
  37. Domain(s) for 5k1v:
    1. 2333375Domain d5k1va4: 5k1v A:638-960 [332390]
      Other proteins in same PDB: d5k1va1, d5k1va2, d5k1va3, d5k1va5, d5k1vb1, d5k1vb2
      automated match to d3se6a4
      complexed with 6px, man, nag, zn
    2. 2333376Domain d5k1vb3: 5k1v B:638-960 [332360]
      Other proteins in same PDB: d5k1va1, d5k1va2, d5k1va3, d5k1va5, d5k1vb1, d5k1vb2
      automated match to d3se6a4
      complexed with 6px, man, nag, zn
  38. Domain(s) for 5lhd:
    1. 2333356Domain d5lhda4: 5lhd A:637-967 [332687]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
    2. 2333357Domain d5lhdb4: 5lhd B:637-967 [332674]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
    3. 2333358Domain d5lhdc4: 5lhd C:637-967 [332588]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
    4. 2333359Domain d5lhdd4: 5lhd D:637-967 [332614]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
  39. Domain(s) for 5mj6:
    1. 2333352Domain d5mj6a4: 5mj6 A:707-1025 [332705]
      Other proteins in same PDB: d5mj6a1, d5mj6a2, d5mj6a3, d5mj6a5, d5mj6b1, d5mj6b2, d5mj6b3, d5mj6b5
      automated match to d4pj6a4
      complexed with 7o2, bma, br, man, nag, zn
    2. 2333353Domain d5mj6b4: 5mj6 B:707-1025 [332733]
      Other proteins in same PDB: d5mj6a1, d5mj6a2, d5mj6a3, d5mj6a5, d5mj6b1, d5mj6b2, d5mj6b3, d5mj6b5
      automated match to d4pj6a4
      complexed with 7o2, bma, br, man, nag, zn
  40. Domain(s) for 5xzx:
  41. Domain(s) for 6bvv:
  42. Domain(s) for 6bvz:
  43. Domain(s) for 6bw9:
  44. Domain(s) for 6bwa:
  45. Domain(s) for 6bwb:
  46. Domain(s) for 6e4l:
  47. Domain(s) for 6ea4:
    1. 3078134Domain d6ea4b4: 6ea4 B:638-960 [378196]
      Other proteins in same PDB: d6ea4a1, d6ea4a2, d6ea4a3, d6ea4a5, d6ea4b1, d6ea4b2, d6ea4b3, d6ea4b5
      automated match to d3se6a4
      complexed with bma, j2g, lys, man, mes, nag, zn
    2. 3078135Domain d6ea4a4: 6ea4 A:638-960 [378197]
      Other proteins in same PDB: d6ea4a1, d6ea4a2, d6ea4a3, d6ea4a5, d6ea4b1, d6ea4b2, d6ea4b3, d6ea4b5
      automated match to d3se6a4
      complexed with bma, j2g, lys, man, mes, nag, zn
  48. Domain(s) for 6enc:
  49. Domain(s) for 6end:
  50. Domain(s) for 6q4r:
  51. Domain(s) for 6qnn:
  52. Domain(s) for 6qnp:
    1. 3073497Domain d6qnpa2: 6qnp A:331-363 [373559]
      Other proteins in same PDB: d6qnpa1, d6qnpb1, d6qnpc1, d6qnpd1
      automated match to d1c9ia1
    2. 3073501Domain d6qnpd2: 6qnp D:331-357 [373563]
      Other proteins in same PDB: d6qnpa1, d6qnpb1, d6qnpc1, d6qnpd1
      automated match to d1c9ia1
    3. 3073503Domain d6qnpc2: 6qnp C:331-358 [373565]
      Other proteins in same PDB: d6qnpa1, d6qnpb1, d6qnpc1, d6qnpd1
      automated match to d1c9ia1
    4. 3073507Domain d6qnpb2: 6qnp B:331-363 [373569]
      Other proteins in same PDB: d6qnpa1, d6qnpb1, d6qnpc1, d6qnpd1
      automated match to d1c9ia1
  53. Domain(s) for 6t6r:
  54. Domain(s) for 6u7e:
    1. 3076848Domain d6u7ea4: 6u7e A:637-967 [376910]
      Other proteins in same PDB: d6u7ea1, d6u7ea2, d6u7ea3, d6u7eb1, d6u7eb2, d6u7eb3
      automated match to d4fyta4
      complexed with bma, nag, zn
    2. 3076925Domain d6u7eb4: 6u7e B:637-967 [376987]
      Other proteins in same PDB: d6u7ea1, d6u7ea2, d6u7ea3, d6u7eb1, d6u7eb2, d6u7eb3
      automated match to d4fyta4
      complexed with bma, nag, zn
  55. Domain(s) for 6u7f:
    1. 3076854Domain d6u7fb4: 6u7f B:637-967 [376916]
      Other proteins in same PDB: d6u7fa1, d6u7fa2, d6u7fa3, d6u7fb1, d6u7fb2, d6u7fb3
      automated match to d4fyta4
      complexed with nag, zn
    2. 3076870Domain d6u7fa4: 6u7f A:637-967 [376932]
      Other proteins in same PDB: d6u7fa1, d6u7fa2, d6u7fa3, d6u7fb1, d6u7fb2, d6u7fb3
      automated match to d4fyta4
      complexed with nag, zn
  56. Domain(s) for 6u7g:
    1. 3076844Domain d6u7gb4: 6u7g B:637-967 [376906]
      Other proteins in same PDB: d6u7ga1, d6u7ga2, d6u7ga3, d6u7gb1, d6u7gb2, d6u7gb3
      automated match to d4fyta4
      complexed with nag, zn
    2. 3076929Domain d6u7ga4: 6u7g A:637-967 [376991]
      Other proteins in same PDB: d6u7ga1, d6u7ga2, d6u7ga3, d6u7gb1, d6u7gb2, d6u7gb3
      automated match to d4fyta4
      complexed with nag, zn
  57. Domain(s) for 6wx8:
    1. 3096116Domain d6wx8a_: 6wx8 A: [396178]
      Other proteins in same PDB: d6wx8b_, d6wx8d_
      automated match to d4uaea_
      complexed with so4
    2. 3096119Domain d6wx8c_: 6wx8 C: [396181]
      Other proteins in same PDB: d6wx8b_, d6wx8d_
      automated match to d4uaea_
      complexed with so4
  58. Domain(s) for 6wx9:
  59. Domain(s) for 7auz:
  60. Domain(s) for 7av0:
  61. Domain(s) for 7av1:
  62. Domain(s) for 7av2:
  63. Domain(s) for 7jjl:

More info for Species Human (Homo sapiens) [TaxId:9606] from a.118.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.118.1.0 automated matches: