Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein Viral RNA polymerase [56695] (18 species) |
Species Hepatitis c virus isolate [TaxId:420174] [188905] (22 PDB entries) |
Domain d3gnva_: 3gnv A: [176783] automated match to d1nb4a_ protein/RNA complex; complexed with gol, xnz |
Domain d3gnvb_: 3gnv B: [176784] automated match to d1nb4a_ protein/RNA complex; complexed with gol, xnz |
Domain d3gnwa_: 3gnw A: [176785] Other proteins in same PDB: d3gnwb2 automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
Domain d3gnwb1: 3gnw B:1-570 [176786] Other proteins in same PDB: d3gnwb2 automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
Domain d3gola_: 3gol A: [176789] automated match to d1nb4a_ complexed with mg, xnd |
Domain d3golb_: 3gol B: [176790] automated match to d1nb4a_ complexed with mg, xnd |
Domain d3skea_: 3ske A: [196188] automated match to d3gnwb_ protein/RNA complex; complexed with 054, po4 |
Domain d3skeb_: 3ske B: [196187] automated match to d3gnwb_ protein/RNA complex; complexed with 054, po4 |
Domain d4iz0a_: 4iz0 A: [196971] automated match to d3gnwb_ complexed with 2bi |
Domain d4j02a_: 4j02 A: [223492] automated match to d3mwva_ protein/RNA complex; complexed with 1je, na, so4 |
Domain d4j02b_: 4j02 B: [223493] automated match to d3mwva_ protein/RNA complex; complexed with 1je, na, so4 |
Domain d4jjub_: 4jju B: [197324] automated match to d3gnwb_ complexed with 1mb, gol, mg |
Domain d4jtwa_: 4jtw A: [253046] automated match to d3gnwb_ protein/RNA complex; complexed with 1nu, gol, mg |
Domain d4jtwb_: 4jtw B: [253047] automated match to d3gnwb_ protein/RNA complex; complexed with 1nu, gol, mg |
Domain d4jy0a_: 4jy0 A: [256822] automated match to d3gnwb_ complexed with 1o9 |
Domain d4jy0b_: 4jy0 B: [262783] automated match to d3gnwb_ complexed with 1o9 |
Domain d4jy1a_: 4jy1 A: [266486] automated match to d3gnwb_ complexed with nn3 |
Domain d4jy1b_: 4jy1 B: [266487] automated match to d3gnwb_ complexed with nn3 |
Domain d4kaia_: 4kai A: [197204] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv |
Domain d4kaib_: 4kai B: [197111] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv |
Domain d4kb7a_: 4kb7 A: [224248] automated match to d4kbia_ protein/RNA complex; complexed with 690 |
Domain d4kb7b_: 4kb7 B: [224249] automated match to d4kbia_ protein/RNA complex; complexed with 690 |
Domain d4kbia_: 4kbi A: [197112] automated match to d3gnwb_ protein/RNA complex; complexed with 1c0 |
Domain d4kbib_: 4kbi B: [197205] automated match to d3gnwb_ protein/RNA complex; complexed with 1c0 |
Domain d4ke5a_: 4ke5 A: [224265] automated match to d4kbia_ protein/RNA complex; complexed with 1pv |
Domain d4ke5b_: 4ke5 B: [224266] automated match to d4kbia_ protein/RNA complex; complexed with 1pv |
Domain d4miaa1: 4mia A:2-562 [263017] Other proteins in same PDB: d4miaa2, d4miab2 automated match to d3gnwb_ complexed with 28l, zn |
Domain d4miab1: 4mia B:2-562 [257080] Other proteins in same PDB: d4miaa2, d4miab2 automated match to d3gnwb_ complexed with 28l, zn |
Domain d4miba1: 4mib A:2-562 [266735] Other proteins in same PDB: d4miba2, d4mibb2 automated match to d3gnwb_ complexed with 28m, dms |
Domain d4mibb1: 4mib B:2-562 [266736] Other proteins in same PDB: d4miba2, d4mibb2 automated match to d3gnwb_ complexed with 28m, dms |
Domain d4mz4a_: 4mz4 A: [229706] automated match to d3upha_ protein/RNA complex; complexed with 2f3, po4 |
Domain d4mz4b_: 4mz4 B: [229710] automated match to d3upha_ protein/RNA complex; complexed with 2f3, po4 |
Domain d4oowa_: 4oow A: [261849] automated match to d3gnwb_ complexed with caq |
Domain d4oowb_: 4oow B: [261850] automated match to d3gnwb_ complexed with caq |
Domain d4ry4a_: 4ry4 A: [309606] automated match to d3gnwb_ mutant |
Domain d4ry4b_: 4ry4 B: [309607] automated match to d3gnwb_ mutant |
Domain d4ry5a_: 4ry5 A: [309608] automated match to d3gnwb_ complexed with mn, utp; mutant |
Domain d4ry5b_: 4ry5 B: [309609] automated match to d3gnwb_ complexed with mn, utp; mutant |
Domain d4ry6a_: 4ry6 A: [309610] automated match to d3gnwb_ mutant |
Domain d4ry6b_: 4ry6 B: [309611] automated match to d3gnwb_ mutant |
Domain d4ry7a_: 4ry7 A: [309612] automated match to d3gnwb_ mutant |
Domain d4ry7b_: 4ry7 B: [309613] automated match to d3gnwb_ mutant |
Timeline for Species Hepatitis c virus isolate [TaxId:420174] from e.8.1.4 Viral RNA polymerase: