Lineage for Species: Seneca valley virus [TaxId: 390157]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410774Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2410775Protein automated matches [190988] (15 species)
    not a true protein
  7. 2410849Species Seneca valley virus [TaxId:390157] [188689] (3 PDB entries)

PDB entries in Species: Seneca valley virus [TaxId: 390157]:

  1. Domain(s) for 3cji:
    1. 2410850Domain d3cjia_: 3cji A: [199192]
      automated match to d1tme1_
      complexed with ca
    2. 2410851Domain d3cjib_: 3cji B: [173278]
      automated match to d2mev3_
      complexed with ca
  2. Domain(s) for 6adm:
    1. 3064280Domain d6admc_: 6adm C: [364342]
      Other proteins in same PDB: d6admr1, d6admr2
      automated match to d3cjib_
      complexed with mg
    2. 3064296Domain d6adma_: 6adm A: [364358]
      Other proteins in same PDB: d6admr1, d6admr2
      automated match to d3cjia_
      complexed with mg
  3. Domain(s) for 6ads:
    1. 3064282Domain d6adsc_: 6ads C: [364344]
      automated match to d3cjib_
    2. 3064288Domain d6adsa_: 6ads A: [364350]
      automated match to d3cjia_

More info for Species Seneca valley virus [TaxId:390157] from b.121.4.0 automated matches

Timeline for Species Seneca valley virus [TaxId:390157] from b.121.4.0 automated matches: