Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein automated matches [190260] (25 species) not a true protein |
Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [188687] (17 PDB entries) |
Domain d2wcxa_: 2wcx A: [206770] automated match to d4e78a_ protein/RNA complex; complexed with mn, vgc |
Domain d3bsaa_: 3bsa A: [172807] automated match to d1nb4a_ protein/RNA complex; complexed with 1pd |
Domain d3bsab_: 3bsa B: [172808] automated match to d1nb4a_ protein/RNA complex; complexed with 1pd |
Domain d3bsca_: 3bsc A: [172809] automated match to d1nb4a_ protein/RNA complex; complexed with 2pd |
Domain d3bscb_: 3bsc B: [172810] automated match to d1nb4a_ protein/RNA complex; complexed with 2pd |
Domain d3co9a_: 3co9 A: [173368] automated match to d1nb4a_ protein/RNA complex; complexed with 3ms |
Domain d3co9b_: 3co9 B: [173369] automated match to d1nb4a_ protein/RNA complex; complexed with 3ms |
Domain d3cvka_: 3cvk A: [173501] automated match to d1nb4a_ protein/RNA complex; complexed with n34 |
Domain d3cvkb_: 3cvk B: [173502] automated match to d1nb4a_ protein/RNA complex; complexed with n34 |
Domain d3d28a_: 3d28 A: [173632] automated match to d1nb4a_ protein/RNA complex; complexed with b34 |
Domain d3d28b_: 3d28 B: [173633] automated match to d1nb4a_ protein/RNA complex; complexed with b34 |
Domain d3d5ma_: 3d5m A: [173699] automated match to d1nb4a_ protein/RNA complex; complexed with 4ms |
Domain d3d5mb_: 3d5m B: [173700] automated match to d1nb4a_ protein/RNA complex; complexed with 4ms |
Domain d3e51a_: 3e51 A: [174667] automated match to d1nb4a_ protein/RNA complex; complexed with n35 |
Domain d3e51b_: 3e51 B: [174668] automated match to d1nb4a_ protein/RNA complex; complexed with n35 |
Domain d3fqka1: 3fqk A:2-562 [175979] Other proteins in same PDB: d3fqka2, d3fqkb2 automated match to d1nb4a_ complexed with 79z |
Domain d3fqkb1: 3fqk B:2-562 [175980] Other proteins in same PDB: d3fqka2, d3fqkb2 automated match to d1nb4a_ complexed with 79z |
Domain d3g86a1: 3g86 A:2-562 [176414] Other proteins in same PDB: d3g86a2, d3g86b2 automated match to d1nb4a_ complexed with ni, t18 |
Domain d3g86b1: 3g86 B:2-562 [176415] Other proteins in same PDB: d3g86a2, d3g86b2 automated match to d1nb4a_ complexed with ni, t18 |
Domain d3gyna_: 3gyn A: [177096] automated match to d1nb4a_ protein/RNA complex; complexed with b42 |
Domain d3gynb_: 3gyn B: [177097] automated match to d1nb4a_ protein/RNA complex; complexed with b42 |
Domain d3h2la_: 3h2l A: [177153] automated match to d1nb4a_ protein/RNA complex; complexed with yak |
Domain d3h2lb_: 3h2l B: [177154] automated match to d1nb4a_ protein/RNA complex; complexed with yak |
Domain d3h98a1: 3h98 A:2-562 [177329] Other proteins in same PDB: d3h98a2, d3h98b2 automated match to d1nb4a_ complexed with b5p, gol |
Domain d3h98b1: 3h98 B:2-563 [177330] Other proteins in same PDB: d3h98a2, d3h98b2 automated match to d1nb4a_ complexed with b5p, gol |
Domain d3igva_: 3igv A: [178317] automated match to d1nb4a_ protein/RNA complex; complexed with b80 |
Domain d3igvb_: 3igv B: [178318] automated match to d1nb4a_ protein/RNA complex; complexed with b80 |
Domain d5w2ea1: 5w2e A:3-564 [337993] Other proteins in same PDB: d5w2ea2, d5w2eb2 automated match to d3q0za_ protein/RNA complex; complexed with 9vy |
Domain d5w2eb1: 5w2e B:3-564 [337980] Other proteins in same PDB: d5w2ea2, d5w2eb2 automated match to d3q0za_ protein/RNA complex; complexed with 9vy |
Domain d6mvpa_: 6mvp A: [373639] automated match to d5pzoa_ complexed with k4s |
Domain d6mvpb_: 6mvp B: [373630] automated match to d5pzoa_ complexed with k4s |
Domain d6w4ga1: 6w4g A:2-562 [396140] Other proteins in same PDB: d6w4ga2, d6w4gb2 automated match to d2ax0a_ complexed with sl4 |
Domain d6w4gb1: 6w4g B:2-562 [396061] Other proteins in same PDB: d6w4ga2, d6w4gb2 automated match to d2ax0a_ complexed with sl4 |
Timeline for Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] from e.8.1.4 automated matches: