Lineage for Species: Hepatitis C virus genotype 1b (isolate bk) [TaxId: 11105]

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2571153Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2571154Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2572036Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 2572350Protein automated matches [190260] (24 species)
    not a true protein
  7. 2572379Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [188687] (15 PDB entries)

PDB entries in Species: Hepatitis C virus genotype 1b (isolate bk) [TaxId: 11105]:

  1. Domain(s) for 2wcx:
  2. Domain(s) for 3bsa:
    1. 2572399Domain d3bsaa_: 3bsa A: [172807]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 1pd
    2. 2572400Domain d3bsab_: 3bsa B: [172808]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 1pd
  3. Domain(s) for 3bsc:
    1. 2572403Domain d3bsca_: 3bsc A: [172809]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 2pd
    2. 2572404Domain d3bscb_: 3bsc B: [172810]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 2pd
  4. Domain(s) for 3co9:
    1. 2572387Domain d3co9a_: 3co9 A: [173368]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 3ms
    2. 2572388Domain d3co9b_: 3co9 B: [173369]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 3ms
  5. Domain(s) for 3cvk:
    1. 2572397Domain d3cvka_: 3cvk A: [173501]
      automated match to d1nb4a_
      protein/RNA complex; complexed with n34
    2. 2572398Domain d3cvkb_: 3cvk B: [173502]
      automated match to d1nb4a_
      protein/RNA complex; complexed with n34
  6. Domain(s) for 3d28:
    1. 2572401Domain d3d28a_: 3d28 A: [173632]
      automated match to d1nb4a_
      protein/RNA complex; complexed with b34
    2. 2572402Domain d3d28b_: 3d28 B: [173633]
      automated match to d1nb4a_
      protein/RNA complex; complexed with b34
  7. Domain(s) for 3d5m:
    1. 2572395Domain d3d5ma_: 3d5m A: [173699]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 4ms
    2. 2572396Domain d3d5mb_: 3d5m B: [173700]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 4ms
  8. Domain(s) for 3e51:
    1. 2572385Domain d3e51a_: 3e51 A: [174667]
      automated match to d1nb4a_
      protein/RNA complex; complexed with n35
    2. 2572386Domain d3e51b_: 3e51 B: [174668]
      automated match to d1nb4a_
      protein/RNA complex; complexed with n35
  9. Domain(s) for 3fqk:
    1. 2572391Domain d3fqka1: 3fqk A:2-562 [175979]
      Other proteins in same PDB: d3fqka2, d3fqkb2
      automated match to d1nb4a_
      complexed with 79z
    2. 2572392Domain d3fqkb1: 3fqk B:2-562 [175980]
      Other proteins in same PDB: d3fqka2, d3fqkb2
      automated match to d1nb4a_
      complexed with 79z
  10. Domain(s) for 3g86:
    1. 2572389Domain d3g86a1: 3g86 A:2-562 [176414]
      Other proteins in same PDB: d3g86a2, d3g86b2
      automated match to d1nb4a_
      complexed with ni, t18
    2. 2572390Domain d3g86b1: 3g86 B:2-562 [176415]
      Other proteins in same PDB: d3g86a2, d3g86b2
      automated match to d1nb4a_
      complexed with ni, t18
  11. Domain(s) for 3gyn:
    1. 2572393Domain d3gyna_: 3gyn A: [177096]
      automated match to d1nb4a_
      protein/RNA complex; complexed with b42
    2. 2572394Domain d3gynb_: 3gyn B: [177097]
      automated match to d1nb4a_
      protein/RNA complex; complexed with b42
  12. Domain(s) for 3h2l:
    1. 2572383Domain d3h2la_: 3h2l A: [177153]
      automated match to d1nb4a_
      protein/RNA complex; complexed with yak
    2. 2572384Domain d3h2lb_: 3h2l B: [177154]
      automated match to d1nb4a_
      protein/RNA complex; complexed with yak
  13. Domain(s) for 3h98:
    1. 2572381Domain d3h98a1: 3h98 A:2-562 [177329]
      Other proteins in same PDB: d3h98a2, d3h98b2
      automated match to d1nb4a_
      complexed with b5p, gol
    2. 2572382Domain d3h98b1: 3h98 B:2-563 [177330]
      Other proteins in same PDB: d3h98a2, d3h98b2
      automated match to d1nb4a_
      complexed with b5p, gol
  14. Domain(s) for 3igv:
    1. 2572405Domain d3igva_: 3igv A: [178317]
      automated match to d1nb4a_
      protein/RNA complex; complexed with b80
    2. 2572406Domain d3igvb_: 3igv B: [178318]
      automated match to d1nb4a_
      protein/RNA complex; complexed with b80
  15. Domain(s) for 5w2e:
    1. 2572407Domain d5w2ea1: 5w2e A:3-564 [337993]
      Other proteins in same PDB: d5w2ea2, d5w2eb2
      automated match to d3q0za_
      protein/RNA complex; complexed with 9vy
    2. 2572408Domain d5w2eb1: 5w2e B:3-564 [337980]
      Other proteins in same PDB: d5w2ea2, d5w2eb2
      automated match to d3q0za_
      protein/RNA complex; complexed with 9vy

More info for Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] from e.8.1.4 automated matches

Timeline for Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] from e.8.1.4 automated matches: