Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2474355Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
  4. 2474356Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families) (S)
    many members have left-handed crossover connection between strand 8 and additional strand 9
  5. 2476490Family c.69.1.0: automated matches [191404] (1 protein)
    not a true family
  6. 2476491Protein automated matches [190543] (105 species)
    not a true protein
  7. 2476970Species Norway rat (Rattus norvegicus) [TaxId:10116] [188292] (9 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 2gbc:
    1. 2476979Domain d2gbca2: 2gbc A:510-767 [204330]
      Other proteins in same PDB: d2gbca1, d2gbcb1
      automated match to d1orva2
      complexed with nag, ndg
    2. 2476980Domain d2gbcb2: 2gbc B:510-767 [204332]
      Other proteins in same PDB: d2gbca1, d2gbcb1
      automated match to d1orva2
      complexed with nag, ndg
  2. Domain(s) for 2gbf:
    1. 2476987Domain d2gbfa2: 2gbf A:510-767 [241912]
      Other proteins in same PDB: d2gbfa1, d2gbfb1
      automated match to d4ffvb2
      complexed with aia
    2. 2476988Domain d2gbfb2: 2gbf B:510-767 [241914]
      Other proteins in same PDB: d2gbfa1, d2gbfb1
      automated match to d4ffvb2
      complexed with aia
  3. Domain(s) for 2gbg:
    1. 2476983Domain d2gbga2: 2gbg A:510-767 [241916]
      Other proteins in same PDB: d2gbga1, d2gbgb1
      automated match to d4ffvb2
      complexed with 1ad, so4
    2. 2476984Domain d2gbgb2: 2gbg B:510-767 [241918]
      Other proteins in same PDB: d2gbga1, d2gbgb1
      automated match to d4ffvb2
      complexed with 1ad, so4
  4. Domain(s) for 2i3z:
    1. 2476981Domain d2i3za2: 2i3z A:510-767 [204699]
      Other proteins in same PDB: d2i3za1, d2i3zb1
      automated match to d1orva2
      complexed with lir
    2. 2476982Domain d2i3zb2: 2i3z B:510-767 [204701]
      Other proteins in same PDB: d2i3za1, d2i3zb1
      automated match to d1orva2
      complexed with lir
  5. Domain(s) for 2oae:
    1. 2476985Domain d2oaea2: 2oae A:510-767 [243308]
      Other proteins in same PDB: d2oaea1, d2oaeb1
      automated match to d4ffvb2
      complexed with ail, so4
    2. 2476986Domain d2oaeb2: 2oae B:510-767 [243310]
      Other proteins in same PDB: d2oaea1, d2oaeb1
      automated match to d4ffvb2
      complexed with ail, so4
  6. Domain(s) for 3bix:
    1. 2476971Domain d3bixa1: 3bix A:52-638 [172647]
      Other proteins in same PDB: d3bixa2, d3bixb2, d3bixc2, d3bixd2
      automated match to d1j06a_
      complexed with edo, nag, ni
    2. 2476972Domain d3bixb1: 3bix B:52-638 [172648]
      Other proteins in same PDB: d3bixa2, d3bixb2, d3bixc2, d3bixd2
      automated match to d1j06a_
      complexed with edo, nag, ni
    3. 2476973Domain d3bixc1: 3bix C:52-638 [172649]
      Other proteins in same PDB: d3bixa2, d3bixb2, d3bixc2, d3bixd2
      automated match to d1j06a_
      complexed with edo, nag, ni
    4. 2476974Domain d3bixd1: 3bix D:52-638 [172650]
      Other proteins in same PDB: d3bixa2, d3bixb2, d3bixc2, d3bixd2
      automated match to d1j06a_
      complexed with edo, nag, ni
  7. Domain(s) for 4ffv:
    1. 2476975Domain d4ffva2: 4ffv A:510-765 [221183]
      Other proteins in same PDB: d4ffva1, d4ffvb1, d4ffvc1, d4ffvc2, d4ffvl1, d4ffvl2
      automated match to d1orva2
    2. 2476976Domain d4ffvb2: 4ffv B:510-767 [221185]
      Other proteins in same PDB: d4ffva1, d4ffvb1, d4ffvc1, d4ffvc2, d4ffvl1, d4ffvl2
      automated match to d1orva2
  8. Domain(s) for 4ffw:
    1. 2476977Domain d4ffwa2: 4ffw A:510-765 [221191]
      Other proteins in same PDB: d4ffwa1, d4ffwb1, d4ffwc1, d4ffwc2, d4ffwl1, d4ffwl2
      automated match to d1orva2
      complexed with 715
    2. 2476978Domain d4ffwb2: 4ffw B:510-767 [221193]
      Other proteins in same PDB: d4ffwa1, d4ffwb1, d4ffwc1, d4ffwc2, d4ffwl1, d4ffwl2
      automated match to d1orva2
      complexed with 715
  9. Domain(s) for 5vta:
    1. 3051848Domain d5vtac2: 5vta C:510-766 [351910]
      Other proteins in same PDB: d5vtaa1, d5vtab1, d5vtac1, d5vtad1, d5vtae1, d5vtae2, d5vtag_, d5vtaj_, d5vtal1, d5vtal2
      automated match to d4ffvb2
      complexed with 9k4, edo, nag, peg, pg4
    2. 3051851Domain d5vtab2: 5vta B:510-766 [351913]
      Other proteins in same PDB: d5vtaa1, d5vtab1, d5vtac1, d5vtad1, d5vtae1, d5vtae2, d5vtag_, d5vtaj_, d5vtal1, d5vtal2
      automated match to d4ffvb2
      complexed with 9k4, edo, nag, peg, pg4
    3. 3051955Domain d5vtaa2: 5vta A:510-766 [352017]
      Other proteins in same PDB: d5vtaa1, d5vtab1, d5vtac1, d5vtad1, d5vtae1, d5vtae2, d5vtag_, d5vtaj_, d5vtal1, d5vtal2
      automated match to d4ffvb2
      complexed with 9k4, edo, nag, peg, pg4
    4. 3051961Domain d5vtad2: 5vta D:510-765 [352023]
      Other proteins in same PDB: d5vtaa1, d5vtab1, d5vtac1, d5vtad1, d5vtae1, d5vtae2, d5vtag_, d5vtaj_, d5vtal1, d5vtal2
      automated match to d4ffvb2
      complexed with 9k4, edo, nag, peg, pg4

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.69.1.0 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.69.1.0 automated matches: