Lineage for Species: Jellyfish (Aequorea victoria) [TaxId: 6100]

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2184480Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2184481Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2184482Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 2184772Protein automated matches [190406] (19 species)
    not a true protein
  7. 2184965Species Jellyfish (Aequorea victoria) [TaxId:6100] [188134] (54 PDB entries)

PDB entries in Species: Jellyfish (Aequorea victoria) [TaxId: 6100]:

  1. Domain(s) for 1w7s:
    1. 2185013Domain d1w7sa_: 1w7s A: [161907]
      automated match to d1hcjc_
    2. 2185014Domain d1w7sb_: 1w7s B: [161908]
      automated match to d1hcjc_
    3. 2185015Domain d1w7sc_: 1w7s C: [161909]
      automated match to d1hcjc_
    4. 2185016Domain d1w7sd_: 1w7s D: [161910]
      automated match to d1hcjc_
  2. Domain(s) for 1w7t:
    1. 2185017Domain d1w7ta_: 1w7t A: [161911]
      automated match to d1hcjc_
    2. 2185018Domain d1w7tb_: 1w7t B: [161912]
      automated match to d1hcjc_
    3. 2185019Domain d1w7tc_: 1w7t C: [161913]
      automated match to d1hcjc_
    4. 2185020Domain d1w7td_: 1w7t D: [161914]
      automated match to d1hcjc_
  3. Domain(s) for 1w7u:
    1. 2185021Domain d1w7ua_: 1w7u A: [161915]
      automated match to d1hcjc_
    2. 2185022Domain d1w7ub_: 1w7u B: [161916]
      automated match to d1hcjc_
    3. 2185023Domain d1w7uc_: 1w7u C: [161917]
      automated match to d1hcjc_
    4. 2185024Domain d1w7ud_: 1w7u D: [161918]
      automated match to d1hcjc_
  4. Domain(s) for 1yhg:
    1. 2185032Domain d1yhga_: 1yhg A: [162201]
      automated match to d1qyoa_
    2. 2185033Domain d1yhgb_: 1yhg B: [162202]
      automated match to d1qyoa_
  5. Domain(s) for 1yhh:
  6. Domain(s) for 1yhi:
  7. Domain(s) for 1yj2:
  8. Domain(s) for 1yjf:
  9. Domain(s) for 1z1p:
  10. Domain(s) for 1z1q:
  11. Domain(s) for 2b3p:
  12. Domain(s) for 2b3q:
    1. 2185027Domain d2b3qa_: 2b3q A: [162985]
      automated match to d1qyoa_
      complexed with mg
    2. 2185028Domain d2b3qb_: 2b3q B: [162986]
      automated match to d1qyoa_
      complexed with mg
    3. 2185029Domain d2b3qc_: 2b3q C: [162987]
      automated match to d1qyoa_
      complexed with mg
    4. 2185030Domain d2b3qd_: 2b3q D: [162988]
      automated match to d1qyoa_
      complexed with mg
  13. Domain(s) for 2due:
  14. Domain(s) for 2duf:
  15. Domain(s) for 2dug:
  16. Domain(s) for 2duh:
  17. Domain(s) for 2dui:
  18. Domain(s) for 2hqz:
  19. Domain(s) for 2q57:
  20. Domain(s) for 2wsn:
  21. Domain(s) for 2wso:
  22. Domain(s) for 2wur:
  23. Domain(s) for 2y0g:
  24. Domain(s) for 2ydz:
  25. Domain(s) for 2ye0:
  26. Domain(s) for 2ye1:
  27. Domain(s) for 3ed8:
    1. 2185034Domain d3ed8a_: 3ed8 A: [174857]
      automated match to d1qyoa_
    2. 2185035Domain d3ed8b_: 3ed8 B: [174858]
      automated match to d1qyoa_
    3. 2185036Domain d3ed8c_: 3ed8 C: [174859]
      automated match to d1qyoa_
    4. 2185037Domain d3ed8d_: 3ed8 D: [174860]
      automated match to d1qyoa_
    5. 2185038Domain d3ed8e_: 3ed8 E: [174861]
      automated match to d1qyoa_
  28. Domain(s) for 3st2:
    1. 2184994Domain d3st2a_: 3st2 A: [185513]
      automated match to d1huya_
      complexed with po4
    2. 2184995Domain d3st2b_: 3st2 B: [185514]
      automated match to d1huya_
      complexed with po4
    3. 2184996Domain d3st2c_: 3st2 C: [185515]
      automated match to d1huya_
      complexed with po4
  29. Domain(s) for 3st3:
    1. 2184990Domain d3st3a_: 3st3 A: [185516]
      automated match to d1huya_
      complexed with po4
    2. 2184991Domain d3st3b_: 3st3 B: [185517]
      automated match to d1huya_
      complexed with po4
    3. 2184992Domain d3st3c_: 3st3 C: [185518]
      automated match to d1huya_
      complexed with po4
  30. Domain(s) for 3st4:
    1. 2184999Domain d3st4a_: 3st4 A: [185519]
      automated match to d1huya_
      complexed with po4
    2. 2185000Domain d3st4b_: 3st4 B: [185520]
      automated match to d1huya_
      complexed with po4
    3. 2185001Domain d3st4c_: 3st4 C: [185521]
      automated match to d1huya_
      complexed with po4
  31. Domain(s) for 3ztf:
  32. Domain(s) for 4ar7:
  33. Domain(s) for 4as8:
  34. Domain(s) for 4b5y:
  35. Domain(s) for 4bdu:
    1. 2185045Domain d4bdua1: 4bdu A:2-230 [265921]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d4bdud1
    2. 2185046Domain d4bdub1: 4bdu B:2-230 [265923]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d4bdud1
    3. 2185047Domain d4bduc1: 4bdu C:2-230 [265925]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d4bdud1
    4. 2185048Domain d4bdud1: 4bdu D:2-230 [265927]
      Other proteins in same PDB: d4bdua2, d4bdub2, d4bduc2, d4bdud2
      automated match to d3vhta_
  36. Domain(s) for 5b61:
    1. 2185056Domain d5b61a_: 5b61 A: [335325]
      automated match to d3st2a_
    2. 2185057Domain d5b61b_: 5b61 B: [335324]
      automated match to d3st2a_
    3. 2185058Domain d5b61c_: 5b61 C: [335331]
      automated match to d3st2a_
    4. 2185059Domain d5b61d_: 5b61 D: [335336]
      automated match to d3st2a_
    5. 2185060Domain d5b61e_: 5b61 E: [335541]
      automated match to d3st2a_
    6. 2185061Domain d5b61f_: 5b61 F: [335444]
      automated match to d3st2a_
  37. Domain(s) for 5btt:
    1. 2185039Domain d5btta1: 5btt A:3-231 [319589]
      Other proteins in same PDB: d5btta2, d5bttb2
      automated match to d2b3pa_
      complexed with gol, so4
    2. 2185040Domain d5bttb1: 5btt B:3-231 [319467]
      Other proteins in same PDB: d5btta2, d5bttb2
      automated match to d2b3pa_
      complexed with gol, so4
  38. Domain(s) for 5dpj:
    1. 2185049Domain d5dpja_: 5dpj A: [313455]
      automated match to d3st2a_
      mutant
    2. 2185050Domain d5dpjb_: 5dpj B: [313471]
      automated match to d3st2a_
      mutant
    3. 2185051Domain d5dpjc_: 5dpj C: [313886]
      automated match to d3st2a_
      mutant
    4. 2185052Domain d5dpjd_: 5dpj D: [313548]
      automated match to d3st2a_
      mutant
  39. Domain(s) for 5dtx:
  40. Domain(s) for 5dty:
  41. Domain(s) for 5dtz:
    1. 2185002Domain d5dtza1: 5dtz A:3-233 [313575]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
    2. 2185003Domain d5dtzb1: 5dtz B:3-232 [313669]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
    3. 2185004Domain d5dtzc1: 5dtz C:3-232 [313694]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
    4. 2185005Domain d5dtzd1: 5dtz D:3-232 [313581]
      Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
      automated match to d3st3a_
      complexed with peg
  42. Domain(s) for 5du0:
    1. 2185041Domain d5du0a_: 5du0 A: [313491]
      automated match to d3st3a_
    2. 2185042Domain d5du0b_: 5du0 B: [313520]
      automated match to d3st3a_
    3. 2185043Domain d5du0c_: 5du0 C: [313522]
      automated match to d3st3a_
    4. 2185044Domain d5du0d_: 5du0 D: [313523]
      automated match to d3st3a_
  43. Domain(s) for 5dy6:
    1. 2185053Domain d5dy6a_: 5dy6 A: [319470]
      automated match to d2b3pa_
      complexed with so4
    2. 2185054Domain d5dy6b_: 5dy6 B: [319527]
      automated match to d2b3pa_
      complexed with so4
  44. Domain(s) for 5hbd:
  45. Domain(s) for 5hge:
  46. Domain(s) for 5hw9:
  47. Domain(s) for 5j2o:
  48. Domain(s) for 5o89:
  49. Domain(s) for 5o8c:
  50. Domain(s) for 5ox8:
  51. Domain(s) for 5ox9:
  52. Domain(s) for 5oxa:
  53. Domain(s) for 5oxb:
  54. Domain(s) for 5t3i:

More info for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 automated matches

Timeline for Species Jellyfish (Aequorea victoria) [TaxId:6100] from d.22.1.1 automated matches: