Lineage for Species: Human rotavirus a [TaxId: 10941]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2778274Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2778275Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families) (S)
  5. 2780621Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2780622Protein automated matches [190437] (70 species)
    not a true protein
  7. 2781109Species Human rotavirus a [TaxId:10941] [187643] (15 PDB entries)

PDB entries in Species: Human rotavirus a [TaxId: 10941]:

  1. Domain(s) for 2dwr:
  2. Domain(s) for 4yfz:
  3. Domain(s) for 4yg0:
  4. Domain(s) for 5gj6:
    1. 2781158Domain d5gj6a_: 5gj6 A: [322176]
      automated match to d2dwra_
      complexed with so4
    2. 2781159Domain d5gj6b_: 5gj6 B: [322177]
      automated match to d2dwra_
      complexed with so4
    3. 2781160Domain d5gj6c_: 5gj6 C: [322198]
      automated match to d2dwra_
      complexed with so4
    4. 2781161Domain d5gj6d_: 5gj6 D: [322200]
      automated match to d2dwra_
      complexed with so4
    5. 2781162Domain d5gj6e_: 5gj6 E: [322175]
      automated match to d2dwra_
      complexed with so4
    6. 2781163Domain d5gj6f_: 5gj6 F: [322225]
      automated match to d2dwra_
      complexed with so4
    7. 2781164Domain d5gj6g_: 5gj6 G: [322236]
      automated match to d2dwra_
      complexed with so4
    8. 2781165Domain d5gj6h_: 5gj6 H: [322233]
      automated match to d2dwra_
      complexed with so4
  5. Domain(s) for 5vki:
    1. 2781122Domain d5vkia_: 5vki A: [341423]
      automated match to d2dwra_
      complexed with gol, so4, thr
    2. 2781123Domain d5vkib_: 5vki B: [341426]
      automated match to d2dwra_
      complexed with gol, so4, thr
  6. Domain(s) for 5vks:
    1. 2781128Domain d5vksa_: 5vks A: [341375]
      automated match to d2dwra_
      complexed with gol, so4
    2. 2781129Domain d5vksb_: 5vks B: [341399]
      automated match to d2dwra_
      complexed with gol, so4
  7. Domain(s) for 5vx8:
    1. 2781153Domain d5vx8a_: 5vx8 A: [354989]
      automated match to d5caza_
      complexed with so4
    2. 2781154Domain d5vx8b_: 5vx8 B: [354991]
      automated match to d5caza_
      complexed with so4
  8. Domain(s) for 5vx9:
  9. Domain(s) for 5yms:
    1. 2781130Domain d5ymsa_: 5yms A: [351735]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    2. 2781131Domain d5ymsb_: 5yms B: [351779]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    3. 2781132Domain d5ymsc_: 5yms C: [351801]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    4. 2781133Domain d5ymsd_: 5yms D: [351732]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    5. 2781134Domain d5ymse_: 5yms E: [351729]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    6. 2781135Domain d5ymsf_: 5yms F: [351742]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    7. 2781136Domain d5ymsg_: 5yms G: [351786]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    8. 2781137Domain d5ymsh_: 5yms H: [351739]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
  10. Domain(s) for 5ymt:
    1. 2781138Domain d5ymta_: 5ymt A: [351754]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    2. 2781139Domain d5ymtb_: 5ymt B: [351709]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    3. 2781140Domain d5ymtc_: 5ymt C: [351703]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    4. 2781141Domain d5ymtd_: 5ymt D: [351704]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    5. 2781142Domain d5ymte_: 5ymt E: [351789]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    6. 2781143Domain d5ymtf_: 5ymt F: [351706]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    7. 2781144Domain d5ymtg_: 5ymt G: [351803]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    8. 2781145Domain d5ymth_: 5ymt H: [351716]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    9. 2781146Domain d5ymti_: 5ymt I: [351788]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    10. 2781147Domain d5ymtj_: 5ymt J: [351814]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    11. 2781148Domain d5ymtk_: 5ymt K: [351728]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    12. 2781149Domain d5ymtl_: 5ymt L: [351804]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    13. 2781150Domain d5ymtm_: 5ymt M: [351726]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    14. 2781151Domain d5ymtn_: 5ymt N: [351737]
      automated match to d5gj6a_
      complexed with gal, glc, nag
  11. Domain(s) for 6h9y:
    1. 2781111Domain d6h9ya1: 6h9y A:228-386 [370036]
      Other proteins in same PDB: d6h9ya2, d6h9yb2
      automated match to d5jdba_
      complexed with btb
    2. 2781112Domain d6h9yb1: 6h9y B:228-386 [370082]
      Other proteins in same PDB: d6h9ya2, d6h9yb2
      automated match to d5jdba_
      complexed with btb
  12. Domain(s) for 6niw:
    1. 2781117Domain d6niwa_: 6niw A: [378836]
      automated match to d5vkia_
      complexed with peg
    2. 2781118Domain d6niwb_: 6niw B: [378808]
      automated match to d5vkia_
      complexed with peg
    3. 2781119Domain d6niwc_: 6niw C: [378807]
      automated match to d5vkia_
      complexed with peg
    4. 2781120Domain d6niwd_: 6niw D: [378806]
      automated match to d5vkia_
      complexed with peg
  13. Domain(s) for 6oai:
    1. 2781124Domain d6oaia_: 6oai A: [383328]
      automated match to d5vkia_
    2. 2781125Domain d6oaib_: 6oai B: [383350]
      automated match to d5vkia_
    3. 2781126Domain d6oaic_: 6oai C: [383331]
      automated match to d5vkia_
    4. 2781127Domain d6oaid_: 6oai D: [383336]
      automated match to d5vkia_
  14. Domain(s) for 6vkx:
    1. 2781114Domain d6vkxa_: 6vkx A: [400674]
      automated match to d5jdba_
      complexed with peg, pg4
    2. 2781115Domain d6vkxb_: 6vkx B: [400737]
      automated match to d5jdba_
      complexed with peg, pg4
    3. 2781116Domain d6vkxc_: 6vkx C: [400709]
      automated match to d5jdba_
      complexed with peg, pg4
  15. Domain(s) for 7jhz:
    1. 2781155Domain d7jhza_: 7jhz A: [418166]
      automated match to d6k2na_
      complexed with bgc, fuc, gal, gol, nag
    2. 2781156Domain d7jhzb_: 7jhz B: [418167]
      automated match to d6k2na_
      complexed with bgc, fuc, gal, gol, nag
    3. 2781157Domain d7jhzc_: 7jhz C: [418168]
      automated match to d6k2na_
      complexed with bgc, fuc, gal, gol, nag

More info for Species Human rotavirus a [TaxId:10941] from b.29.1.0 automated matches

Timeline for Species Human rotavirus a [TaxId:10941] from b.29.1.0 automated matches: