Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2568471Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
    contains a cluster of helices and an alpha+beta sandwich
  4. 2568472Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families) (S)
  5. 2568473Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)
  6. 2569281Protein automated matches [190161] (25 species)
    not a true protein
  7. 2569346Species Escherichia coli [TaxId:562] [187306] (70 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1ylj:
  2. Domain(s) for 1ylp:
  3. Domain(s) for 1ylt:
  4. Domain(s) for 1ylw:
  5. Domain(s) for 1yly:
    1. 2569369Domain d1ylya_: 1yly A: [162244]
      automated match to d1iysa_
      complexed with cb4, po4
    2. 2569370Domain d1ylyb_: 1yly B: [162245]
      automated match to d1iysa_
      complexed with cb4, po4
  6. Domain(s) for 1ylz:
    1. 2569371Domain d1ylza_: 1ylz A: [162246]
      automated match to d1iysa_
      complexed with cb4, po4
    2. 2569372Domain d1ylzb_: 1ylz B: [162247]
      automated match to d1iysa_
      complexed with cb4, po4
  7. Domain(s) for 1ym1:
    1. 2569358Domain d1ym1a_: 1ym1 A: [162249]
      automated match to d1iysa_
      complexed with po4, sm2
    2. 2569359Domain d1ym1b_: 1ym1 B: [162250]
      automated match to d1iysa_
      complexed with po4, sm2
  8. Domain(s) for 1yms:
    1. 2569387Domain d1ymsa_: 1yms A: [162255]
      automated match to d1iysa_
      complexed with nbf
    2. 2569388Domain d1ymsb_: 1yms B: [162256]
      automated match to d1iysa_
      complexed with nbf
  9. Domain(s) for 1ymx:
    1. 2569390Domain d1ymxa_: 1ymx A: [162258]
      automated match to d1iysa_
      complexed with cfx
    2. 2569391Domain d1ymxb_: 1ymx B: [162259]
      automated match to d1iysa_
      complexed with cfx
  10. Domain(s) for 2p74:
    1. 2569347Domain d2p74a_: 2p74 A: [167042]
      automated match to d1iyqa_
      complexed with k, po4
    2. 2569348Domain d2p74b_: 2p74 B: [167043]
      automated match to d1iyqa_
      complexed with k, po4
  11. Domain(s) for 2v1z:
  12. Domain(s) for 2v20:
  13. Domain(s) for 2zj9:
    1. 2569407Domain d2zj9a_: 2zj9 A: [171241]
      automated match to d1c3ba_
      complexed with ipa, na
    2. 2569408Domain d2zj9b_: 2zj9 B: [171242]
      automated match to d1c3ba_
      complexed with ipa, na
  14. Domain(s) for 3g2y:
    1. 2569402Domain d3g2ya_: 3g2y A: [176314]
      automated match to d1iyqa_
      complexed with dms, gf4
    2. 2569403Domain d3g2yb_: 3g2y B: [176315]
      automated match to d1iyqa_
      complexed with dms, gf4
  15. Domain(s) for 3g2z:
    1. 2569420Domain d3g2za_: 3g2z A: [176316]
      automated match to d1iysa_
      complexed with dms, gz2
    2. 2569421Domain d3g2zb_: 3g2z B: [176317]
      automated match to d1iysa_
      complexed with dms, gz2
  16. Domain(s) for 3g30:
  17. Domain(s) for 3g31:
    1. 2569431Domain d3g31a_: 3g31 A: [176319]
      automated match to d1iysa_
      complexed with dms, gf1, po4
    2. 2569432Domain d3g31b_: 3g31 B: [176320]
      automated match to d1iysa_
      complexed with dms, gf1, po4
  18. Domain(s) for 3g32:
    1. 2569400Domain d3g32a_: 3g32 A: [176321]
      automated match to d1iysa_
      complexed with 3g3, dms, po4
    2. 2569401Domain d3g32b_: 3g32 B: [176322]
      automated match to d1iysa_
      complexed with 3g3, dms, po4
  19. Domain(s) for 3g34:
    1. 2569398Domain d3g34a_: 3g34 A: [176323]
      automated match to d1iysa_
      complexed with 1ce, dms, po4
    2. 2569399Domain d3g34b_: 3g34 B: [176324]
      automated match to d1iysa_
      complexed with 1ce, dms, po4
  20. Domain(s) for 3g35:
    1. 2569413Domain d3g35a_: 3g35 A: [176325]
      automated match to d1iysa_
      complexed with dms, f13
    2. 2569414Domain d3g35b_: 3g35 B: [176326]
      automated match to d1iysa_
      complexed with dms, f13
  21. Domain(s) for 3hlw:
    1. 2569405Domain d3hlwa_: 3hlw A: [177682]
      automated match to d1iysa_
      complexed with ce3
    2. 2569406Domain d3hlwb_: 3hlw B: [177683]
      automated match to d1iysa_
      complexed with ce3
  22. Domain(s) for 3hre:
    1. 2569416Domain d3hrea_: 3hre A: [177794]
      automated match to d1iysa_
      complexed with po4
    2. 2569417Domain d3hreb_: 3hre B: [177795]
      automated match to d1iysa_
      complexed with po4
  23. Domain(s) for 3huo:
    1. 2569427Domain d3huoa_: 3huo A: [177848]
      automated match to d1iysa_
      complexed with pnk, pnn
    2. 2569428Domain d3huob_: 3huo B: [177849]
      automated match to d1iysa_
      complexed with pnk, pnn
  24. Domain(s) for 3hvf:
    1. 2569425Domain d3hvfa_: 3hvf A: [177864]
      automated match to d1iysa_
      complexed with pnk
    2. 2569426Domain d3hvfb_: 3hvf B: [177865]
      automated match to d1iysa_
      complexed with pnk
  25. Domain(s) for 3jyi:
    1. 2569441Domain d3jyia_: 3jyi A: [178921]
      automated match to d1axba_
      complexed with epe, po4; mutant
    2. 2569442Domain d3jyib_: 3jyi B: [178922]
      automated match to d1axba_
      complexed with epe, po4; mutant
    3. 2569443Domain d3jyic_: 3jyi C: [178923]
      automated match to d1axba_
      complexed with epe, po4; mutant
    4. 2569444Domain d3jyid_: 3jyi D: [178924]
      automated match to d1axba_
      complexed with epe, po4; mutant
    5. 2569445Domain d3jyie_: 3jyi E: [178925]
      automated match to d1axba_
      complexed with epe, po4; mutant
    6. 2569446Domain d3jyif_: 3jyi F: [178926]
      automated match to d1axba_
      complexed with epe, po4; mutant
  26. Domain(s) for 3q07:
    1. 2569396Domain d3q07a_: 3q07 A: [184106]
      automated match to d1iysa_
      complexed with wpp, ypp
    2. 2569397Domain d3q07b_: 3q07 B: [184107]
      automated match to d1iysa_
      complexed with wpp, ypp
  27. Domain(s) for 3q1f:
    1. 2569392Domain d3q1fa_: 3q1f A: [184153]
      automated match to d1iysa_
      complexed with ypp
    2. 2569393Domain d3q1fb_: 3q1f B: [184154]
      automated match to d1iysa_
      complexed with ypp
  28. Domain(s) for 4dds:
    1. 2569373Domain d4ddsa_: 4dds A: [219709]
      automated match to d2p74a_
      complexed with 0j7, dms
    2. 2569374Domain d4ddsb_: 4dds B: [219710]
      automated match to d2p74a_
      complexed with 0j7, dms
  29. Domain(s) for 4ddy:
    1. 2569375Domain d4ddya_: 4ddy A: [219711]
      automated match to d2p74a_
      complexed with dms, dn6
    2. 2569376Domain d4ddyb_: 4ddy B: [219712]
      automated match to d2p74a_
      complexed with dms, dn6
  30. Domain(s) for 4de0:
    1. 2569363Domain d4de0a_: 4de0 A: [195747]
      automated match to d2p74a_
      complexed with 0jb, dms
    2. 2569364Domain d4de0b_: 4de0 B: [201690]
      automated match to d2p74a_
      complexed with 0jb, dms
  31. Domain(s) for 4de1:
    1. 2569367Domain d4de1a_: 4de1 A: [219713]
      automated match to d2p74a_
      complexed with 0j6, dms
    2. 2569368Domain d4de1b_: 4de1 B: [219714]
      automated match to d2p74a_
      complexed with 0j6, dms
  32. Domain(s) for 4de2:
    1. 2569378Domain d4de2a_: 4de2 A: [219715]
      automated match to d2p74a_
      complexed with dms, dn3
    2. 2569379Domain d4de2b_: 4de2 B: [219716]
      automated match to d2p74a_
      complexed with dms, dn3
  33. Domain(s) for 4de3:
    1. 2569381Domain d4de3a_: 4de3 A: [219717]
      automated match to d2p74a_
      complexed with dms, dn8
    2. 2569382Domain d4de3b_: 4de3 B: [219718]
      automated match to d2p74a_
      complexed with dms, dn8
  34. Domain(s) for 4hbt:
  35. Domain(s) for 4hbu:
  36. Domain(s) for 4ibr:
  37. Domain(s) for 4len:
    1. 2569422Domain d4lena_: 4len A: [257014]
      automated match to d1ylja_
      complexed with 2gk
    2. 2569423Domain d4lenb_: 4len B: [257833]
      automated match to d1ylja_
      complexed with 2gk
  38. Domain(s) for 4op8:
  39. Domain(s) for 4opq:
  40. Domain(s) for 4opr:
  41. Domain(s) for 4opz:
  42. Domain(s) for 4oq0:
  43. Domain(s) for 4oqi:
  44. Domain(s) for 4ua6:
    1. 2569349Domain d4ua6a_: 4ua6 A: [274282]
      automated match to d1ylta_
      complexed with k, po4
    2. 2569350Domain d4ua6b_: 4ua6 B: [274287]
      automated match to d1ylta_
      complexed with k, po4
  45. Domain(s) for 4ua7:
    1. 2569361Domain d4ua7a_: 4ua7 A: [274283]
      automated match to d1ylta_
      complexed with 3gk, po4
    2. 2569362Domain d4ua7b_: 4ua7 B: [274284]
      automated match to d1ylta_
      complexed with 3gk, po4
  46. Domain(s) for 4ua9:
    1. 2569352Domain d4ua9a_: 4ua9 A: [274280]
      automated match to d1ylta_
      complexed with cb4, po4
    2. 2569353Domain d4ua9b_: 4ua9 B: [274281]
      automated match to d1ylta_
      complexed with cb4, po4
  47. Domain(s) for 4uaa:
    1. 2569356Domain d4uaaa_: 4uaa A: [274286]
      automated match to d1ylta_
      complexed with 3gk, po4
    2. 2569357Domain d4uaab_: 4uaa B: [274285]
      automated match to d1ylta_
      complexed with 3gk, po4
  48. Domain(s) for 4xxr:
    1. 2569385Domain d4xxra_: 4xxr A: [270868]
      automated match to d1ylta_
      complexed with jsc, jsd, jse, k
    2. 2569386Domain d4xxrb_: 4xxr B: [270869]
      automated match to d1ylta_
      complexed with jsc, jsd, jse, k
  49. Domain(s) for 5fa7:
    1. 2569429Domain d5fa7a_: 5fa7 A: [314020]
      automated match to d1ylpa_
      complexed with 5vr
    2. 2569430Domain d5fa7b_: 5fa7 B: [314006]
      automated match to d1ylpa_
      complexed with 5vr
  50. Domain(s) for 5fao:
    1. 2569449Domain d5faoa_: 5fao A: [314037]
      automated match to d1ylpa_
      complexed with 5vw
    2. 2569450Domain d5faob_: 5fao B: [314056]
      automated match to d1ylpa_
      complexed with 5vw
  51. Domain(s) for 5fap:
    1. 2569447Domain d5fapa_: 5fap A: [314085]
      automated match to d1ylpa_
      complexed with 602
    2. 2569448Domain d5fapb_: 5fap B: [314063]
      automated match to d1ylpa_
      complexed with 602
  52. Domain(s) for 5npo:
  53. Domain(s) for 5top:
    1. 2569383Domain d5topa_: 5top A: [341354]
      automated match to d4pm5a_
      complexed with 7g4, jsc, jse, k, ru
    2. 2569384Domain d5topb_: 5top B: [341355]
      automated match to d4pm5a_
      complexed with 7g4, jsc, jse, k, ru
  54. Domain(s) for 5toy:
    1. 2569394Domain d5toya_: 5toy A: [341357]
      automated match to d1ylta_
      complexed with jsc, jsd, k, po4, ru, suc
    2. 2569395Domain d5toyb_: 5toy B: [341356]
      automated match to d1ylta_
      complexed with jsc, jsd, k, po4, ru, suc
  55. Domain(s) for 5tw6:
  56. Domain(s) for 5twd:
  57. Domain(s) for 5twe:
  58. Domain(s) for 5u53:
  59. Domain(s) for 5ujo:
    1. 2569409Domain d5ujoa_: 5ujo A: [329634]
      automated match to d1ylta_
      complexed with 8cy, k, lsi
    2. 2569410Domain d5ujob_: 5ujo B: [329629]
      automated match to d1ylta_
      complexed with 8cy, k, lsi
  60. Domain(s) for 5vle:
    1. 2569354Domain d5vlea_: 5vle A: [341418]
      automated match to d4ua6a_
      complexed with jsc, jsd, jse, k, po4, ru
    2. 2569355Domain d5vleb_: 5vle B: [341434]
      automated match to d4ua6a_
      complexed with jsc, jsd, jse, k, po4, ru
  61. Domain(s) for 5vth:
  62. Domain(s) for 6bt6:
    1. 3053355Domain d6bt6a1: 6bt6 A:26-290 [353417]
      Other proteins in same PDB: d6bt6a2
      automated match to d4ua6a_
      complexed with 3gk
    2. 3053400Domain d6bt6b_: 6bt6 B: [353462]
      Other proteins in same PDB: d6bt6a2
      automated match to d4ua6a_
      complexed with 3gk
  63. Domain(s) for 6bu3:
    1. 3053366Domain d6bu3b_: 6bu3 B: [353428]
      automated match to d1ylpa_
      complexed with 3gk, so4
    2. 3053422Domain d6bu3a_: 6bu3 A: [353484]
      automated match to d1ylpa_
      complexed with 3gk, so4
  64. Domain(s) for 6c78:
  65. Domain(s) for 6c79:
  66. Domain(s) for 6c7a:
  67. Domain(s) for 6cyk:
    1. 3058404Domain d6cyka_: 6cyk A: [358466]
      automated match to d1ylta_
      complexed with act; mutant
    2. 3058662Domain d6cykb_: 6cyk B: [358724]
      automated match to d1ylta_
      complexed with act; mutant
  68. Domain(s) for 6cyn:
    1. 3058359Domain d6cynf_: 6cyn F: [358421]
      automated match to d1ylwa_
      mutant
    2. 3058361Domain d6cync_: 6cyn C: [358423]
      automated match to d1ylwa_
      mutant
    3. 3058379Domain d6cynd_: 6cyn D: [358441]
      automated match to d1ylwa_
      mutant
    4. 3058412Domain d6cynb_: 6cyn B: [358474]
      automated match to d1ylwa_
      mutant
    5. 3058494Domain d6cyne_: 6cyn E: [358556]
      automated match to d1ylwa_
      mutant
    6. 3058619Domain d6cyng_: 6cyn G: [358681]
      automated match to d1ylwa_
      mutant
    7. 3058629Domain d6cynh_: 6cyn H: [358691]
      automated match to d1ylwa_
      mutant
    8. 3058721Domain d6cyna_: 6cyn A: [358783]
      automated match to d1ylwa_
      mutant
  69. Domain(s) for 6cyq:
    1. 3058364Domain d6cyqe_: 6cyq E: [358426]
      automated match to d4pm5a_
      complexed with ce4, gol
    2. 3058369Domain d6cyqd_: 6cyq D: [358431]
      automated match to d4pm5a_
      complexed with ce4, gol
    3. 3058398Domain d6cyqf_: 6cyq F: [358460]
      automated match to d4pm5a_
      complexed with ce4, gol
    4. 3058437Domain d6cyqa_: 6cyq A: [358499]
      automated match to d4pm5a_
      complexed with ce4, gol
    5. 3058444Domain d6cyqh_: 6cyq H: [358506]
      automated match to d4pm5a_
      complexed with ce4, gol
    6. 3058453Domain d6cyqg_: 6cyq G: [358515]
      automated match to d4pm5a_
      complexed with ce4, gol
    7. 3058478Domain d6cyqc_: 6cyq C: [358540]
      automated match to d4pm5a_
      complexed with ce4, gol
    8. 3058523Domain d6cyqb_: 6cyq B: [358585]
      automated match to d4pm5a_
      complexed with ce4, gol
  70. Domain(s) for 6cyu:

More info for Species Escherichia coli [TaxId:562] from e.3.1.1 automated matches

Timeline for Species Escherichia coli [TaxId:562] from e.3.1.1 automated matches: