Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1898312Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 1898313Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 1898314Family d.20.1.1: UBC-related [54496] (7 proteins)
  6. 1898507Protein automated matches [190124] (12 species)
    not a true protein
  7. 1898519Species Human (Homo sapiens) [TaxId:9606] [186848] (39 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1x23:
    1. 1898527Domain d1x23b_: 1x23 B: [121616]
      Other proteins in same PDB: d1x23a1
      automated match to d1ur6a_
    2. 1898528Domain d1x23c_: 1x23 C: [121617]
      Other proteins in same PDB: d1x23a1
      automated match to d1ur6a_
    3. 1898529Domain d1x23d_: 1x23 D: [121618]
      Other proteins in same PDB: d1x23a1
      automated match to d1ur6a_
  2. Domain(s) for 2c2v:
    1. 1898591Domain d2c2vb_: 2c2v B: [129686]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    2. 1898592Domain d2c2ve_: 2c2v E: [129688]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    3. 1898593Domain d2c2vf_: 2c2v F: [129689]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
    4. 1898594Domain d2c2vh_: 2c2v H: [129690]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    5. 1898595Domain d2c2vi_: 2c2v I: [129691]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
    6. 1898596Domain d2c2vk_: 2c2v K: [129692]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    7. 1898597Domain d2c2vl_: 2c2v L: [129693]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
  3. Domain(s) for 2c4p:
    1. 1898563Domain d2c4pa_: 2c4p A: [163259]
      automated match to d1z2ua1
    2. 1898564Domain d2c4pb_: 2c4p B: [163260]
      automated match to d1z2ua1
  4. Domain(s) for 2clw:
    1. 1898548Domain d2clwa_: 2clw A: [130596]
      automated match to d1ur6a_
      complexed with gol, so4
    2. 1898549Domain d2clwb_: 2clw B: [130597]
      automated match to d1ur6a_
      complexed with gol, so4
    3. 1898550Domain d2clwc_: 2clw C: [130598]
      automated match to d1ur6a_
      complexed with gol, so4
    4. 1898551Domain d2clwd_: 2clw D: [130599]
      automated match to d1ur6a_
      complexed with gol, so4
  5. Domain(s) for 2cyx:
    1. 1898569Domain d2cyxa_: 2cyx A: [163514]
      automated match to d2ucza_
    2. 1898570Domain d2cyxb_: 2cyx B: [163515]
      automated match to d2ucza_
    3. 1898571Domain d2cyxc_: 2cyx C: [163516]
      automated match to d2ucza_
  6. Domain(s) for 2fuh:
  7. Domain(s) for 2kly:
  8. Domain(s) for 2lxp:
  9. Domain(s) for 2qgx:
    1. 1898543Domain d2qgxa_: 2qgx A: [167587]
      automated match to d1zuoa1
    2. 1898544Domain d2qgxb_: 2qgx B: [167588]
      automated match to d1zuoa1
    3. 1898545Domain d2qgxc_: 2qgx C: [167589]
      automated match to d1zuoa1
    4. 1898546Domain d2qgxd_: 2qgx D: [167590]
      automated match to d1zuoa1
  10. Domain(s) for 2yho:
    1. 1898531Domain d2yhob_: 2yho B: [170787]
      automated match to d1z2ua1
      complexed with act, zn
    2. 1898532Domain d2yhod_: 2yho D: [170788]
      automated match to d1z2ua1
      complexed with act, zn
    3. 1898533Domain d2yhof_: 2yho F: [170789]
      automated match to d1z2ua1
      complexed with act, zn
    4. 1898534Domain d2yhoh_: 2yho H: [170790]
      automated match to d1z2ua1
      complexed with act, zn
  11. Domain(s) for 3a33:
  12. Domain(s) for 3h8k:
  13. Domain(s) for 3hct:
  14. Domain(s) for 3hcu:
    1. 1898573Domain d3hcub_: 3hcu B: [177395]
      automated match to d1j7db_
      protein/DNA complex; complexed with zn
    2. 1898574Domain d3hcud_: 3hcu D: [177396]
      automated match to d1j7db_
      protein/DNA complex; complexed with zn
  15. Domain(s) for 3l1z:
  16. Domain(s) for 3ptf:
    1. 1898559Domain d3ptfa_: 3ptf A: [183968]
      Other proteins in same PDB: d3ptfc_, d3ptfd_
      automated match to d1z2ua1
    2. 1898560Domain d3ptfb_: 3ptf B: [183969]
      Other proteins in same PDB: d3ptfc_, d3ptfd_
      automated match to d1z2ua1
  17. Domain(s) for 3rpg:
  18. Domain(s) for 3tgd:
  19. Domain(s) for 3von:
    1. 1898575Domain d3vonc_: 3von C: [250627]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    2. 1898576Domain d3vone_: 3von E: [250629]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    3. 1898577Domain d3vong_: 3von G: [250631]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    4. 1898578Domain d3vonj_: 3von J: [250634]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    5. 1898579Domain d3vonl_: 3von L: [250636]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    6. 1898580Domain d3vonn_: 3von N: [250638]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    7. 1898581Domain d3vonq_: 3von Q: [250641]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    8. 1898582Domain d3vons_: 3von S: [250643]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    9. 1898583Domain d3vonu_: 3von U: [250645]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    10. 1898584Domain d3vonx_: 3von X: [250648]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    11. 1898585Domain d3vonz_: 3von Z: [250650]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
  20. Domain(s) for 4ap4:
    1. 1898539Domain d4ap4b_: 4ap4 B: [194914]
      Other proteins in same PDB: d4ap4c_, d4ap4f_
      automated match to d2c4pb_
      complexed with zn
    2. 1898540Domain d4ap4e_: 4ap4 E: [201467]
      Other proteins in same PDB: d4ap4c_, d4ap4f_
      automated match to d4ap4b_
      complexed with zn
  21. Domain(s) for 4auq:
    1. 1898541Domain d4auqa_: 4auq A: [194819]
      Other proteins in same PDB: d4auqc_, d4auqf_
      automated match to d3a33a_
      complexed with zn
    2. 1898542Domain d4auqd_: 4auq D: [194817]
      Other proteins in same PDB: d4auqc_, d4auqf_
      automated match to d3a33a_
      complexed with zn
  22. Domain(s) for 4ccg:
    1. 1898565Domain d4ccga_: 4ccg A: [251362]
      automated match to d1yh2a1
      complexed with cl, epe, gol, na, nh4, so4, zn
    2. 1898566Domain d4ccgb_: 4ccg B: [251363]
      automated match to d1yh2a1
      complexed with cl, epe, gol, na, nh4, so4, zn
  23. Domain(s) for 4lad:
  24. Domain(s) for 4ldt:
  25. Domain(s) for 4nr3:
  26. Domain(s) for 4nrg:
  27. Domain(s) for 4nri:
  28. Domain(s) for 4onl:
  29. Domain(s) for 4onm:
  30. Domain(s) for 4onn:
  31. Domain(s) for 4qpl:
    1. 1898536Domain d4qplb_: 4qpl B: [260380]
      automated match to d2yhob_
      complexed with v3l, zn
    2. 1898537Domain d4qpld_: 4qpl D: [260760]
      automated match to d2yhob_
      complexed with v3l, zn
  32. Domain(s) for 4s3o:
    1. 1898555Domain d4s3oa_: 4s3o A: [274919]
      automated match to d3rpga_
      complexed with zn
    2. 1898556Domain d4s3od_: 4s3o D: [274920]
      automated match to d3rpga_
      complexed with zn
  33. Domain(s) for 4tkp:
  34. Domain(s) for 4v3k:
    1. 1898557Domain d4v3ka_: 4v3k A: [271275]
      Other proteins in same PDB: d4v3kb_, d4v3ke_
      automated match to d3a33a_
      complexed with cl, edo, zn
    2. 1898558Domain d4v3kd_: 4v3k D: [271277]
      Other proteins in same PDB: d4v3kb_, d4v3ke_
      automated match to d3a33a_
      complexed with cl, edo, zn
  35. Domain(s) for 4v3l:
  36. Domain(s) for 4wz3:
  37. Domain(s) for 5aiu:
    1. 1898567Domain d5aiub_: 5aiu B: [274672]
      Other proteins in same PDB: d5aiuc_, d5aiuf_
      automated match to d3w31b_
      complexed with edo, zn
    2. 1898568Domain d5aiue_: 5aiu E: [274675]
      Other proteins in same PDB: d5aiuc_, d5aiuf_
      automated match to d3w31b_
      complexed with edo, zn
  38. Domain(s) for 5d0k:
    1. 1898587Domain d5d0ka_: 5d0k A: [279796]
      Other proteins in same PDB: d5d0kb_, d5d0ke_, d5d0kh_, d5d0kk_
      automated match to d3tgda_
      complexed with zn
    2. 1898588Domain d5d0kd_: 5d0k D: [279801]
      Other proteins in same PDB: d5d0kb_, d5d0ke_, d5d0kh_, d5d0kk_
      automated match to d3tgda_
      complexed with zn
    3. 1898589Domain d5d0kg_: 5d0k G: [279798]
      Other proteins in same PDB: d5d0kb_, d5d0ke_, d5d0kh_, d5d0kk_
      automated match to d3tgda_
      complexed with zn
    4. 1898590Domain d5d0kj_: 5d0k J: [279803]
      Other proteins in same PDB: d5d0kb_, d5d0ke_, d5d0kh_, d5d0kk_
      automated match to d3tgda_
      complexed with zn
  39. Domain(s) for 5d0m:

More info for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches: