Lineage for d3u5ya_ (3u5y A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2832343Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2832344Protein automated matches [190075] (132 species)
    not a true protein
  7. 2833050Species Rauvolfia serpentina [TaxId:4060] [189830] (12 PDB entries)
  8. 2833059Domain d3u5ya_: 3u5y A: [186091]
    automated match to d1cbga_
    complexed with cl, scg

Details for d3u5ya_

PDB Entry: 3u5y (more details), 2.3 Å

PDB Description: structures of alkaloid biosynthetic glucosidases decode substrate specificity
PDB Compounds: (A:) Raucaffricine-O-beta-D-glucosidase

SCOPe Domain Sequences for d3u5ya_:

Sequence, based on SEQRES records: (download)

>d3u5ya_ c.1.8.0 (A:) automated matches {Rauvolfia serpentina [TaxId: 4060]}
datrisrsdfpadfimgtgssayqieggardggrgpsiwdtfthrrpdmirggtngdvav
dsyhlykedvnilknlgldayrfsiswsrvlpggrlsggvnkeginyynnlidgllangi
kpfvtlfhwdvpqaledeyggflsprivddfceyaelcfwefgdrvkhwmtlnqpwtfsv
hgyatglyapgrgrtspehvnhptvqhrcstvapqcicstgnpgtepywvthhlllahaa
avelyknkfqrgqegqigishatqwmepwdensasdveaaaraldfmlgwfmepitsgdy
pksmkkfvgsrlpkfspeqskmlkgsydfvglnyytasyvtnastnssgsnnfsyntdih
vtyetdrngvpigpqsgsdwlliypegirkilvytkktynvpliyvtengvddvkntnlt
lsearkdsmrlkylqdhifnvrqamndgvnvkgyfawslldnfewgegygvrfgiihidy
ndnfarypkdsavwlmnsfhk

Sequence, based on observed residues (ATOM records): (download)

>d3u5ya_ c.1.8.0 (A:) automated matches {Rauvolfia serpentina [TaxId: 4060]}
datrisrsdfpadfimgtgssayqieggardggrgpsiwdtfthrrpdmirggtngdvav
dsyhlykedvnilknlgldayrfsiswsrvlpggrlsggvnkeginyynnlidgllangi
kpfvtlfhwdvpqaledeyggflsprivddfceyaelcfwefgdrvkhwmtlnqpwtfsv
hgyatglyapgrgrstgnpgtepywvthhlllahaaavelyknkfqrgqegqigishatq
wmepwdensasdveaaaraldfmlgwfmepitsgdypksmkkfvgsrlpkfspeqskmlk
gsydfvglnyytasyvtnasnfsyntdihvtyetdrngvpigpqsgsdwlliypegirki
lvytkktynvpliyvtengvddvkntnltlsearkdsmrlkylqdhifnvrqamndgvnv
kgyfawslldnfewgegygvrfgiihidyndnfarypkdsavwlmnsfhk

SCOPe Domain Coordinates for d3u5ya_:

Click to download the PDB-style file with coordinates for d3u5ya_.
(The format of our PDB-style files is described here.)

Timeline for d3u5ya_: