SCOPe 2.08: Domain d3stfd_: 3stf D:

Lineage for d3stfd_ (3stf D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein automated matches [190083] (10 species)
   not a true protein

7. Species Neisseria meningitidis [TaxId:122586] [189819] (16 PDB entries)

8. Domain d3stfd_: 3stf D: [185556]
   automated match to d1d9ea_
   complexed with cl, gol, na; mutant

Details for d3stfd_

PDB Entry: 3stf, 1.9 Å

PDB Description: Crystal structure of a mutant (S211A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis

PDB Compounds: (D:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d3stfd_:

Sequence, based on SEQRES records:

>d3stfd_ c.1.10.4 (D:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkanr
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtrdagsaaaggrraqaldlalagmatrlaglfleshpd
pklakcdgpsalplhlledflirikalddliksqpi

Sequence, based on observed residues (ATOM records):

>d3stfd_ c.1.10.4 (D:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkanr
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtrrraqaldlalagmatrlaglfleslhlledflirik
alddliksqpi

Timeline for d3stfd_:

• d3stfd_ first appeared in SCOPe 2.01
  
• d3stfd_ appears in SCOPe 2.07