Lineage for d1oxya1 (1oxy A:1-109)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2004613Fold a.85: Hemocyanin, N-terminal domain [48049] (1 superfamily)
    6 helices; bundle; one central helix is surrounded by 5 others
  4. 2004614Superfamily a.85.1: Hemocyanin, N-terminal domain [48050] (1 family) (S)
    automatically mapped to Pfam PF03722
  5. 2004615Family a.85.1.1: Hemocyanin, N-terminal domain [48051] (1 protein)
  6. 2004616Protein Hemocyanin, N-terminal domain [48052] (2 species)
    Middle domain is all-alpha; C-terminal domain is immunoglobulin-like sandwich
  7. 2004617Species Horseshoe crab (Limulus polyphemus) [TaxId:6850] [48053] (4 PDB entries)
  8. 2004619Domain d1oxya1: 1oxy A:1-109 [18486]
    Other proteins in same PDB: d1oxya2, d1oxya3
    complexed with cu, oxy

Details for d1oxya1

PDB Entry: 1oxy (more details), 2.4 Å

PDB Description: crystallographic analysis of oxygenated and deoxygenated states of arthropod hemocyanin shows unusual differences
PDB Compounds: (A:) hemocyanin (subunit type II)

SCOPe Domain Sequences for d1oxya1:

Sequence, based on SEQRES records: (download)

>d1oxya1 a.85.1.1 (A:1-109) Hemocyanin, N-terminal domain {Horseshoe crab (Limulus polyphemus) [TaxId: 6850]}

Sequence, based on observed residues (ATOM records): (download)

>d1oxya1 a.85.1.1 (A:1-109) Hemocyanin, N-terminal domain {Horseshoe crab (Limulus polyphemus) [TaxId: 6850]}

SCOPe Domain Coordinates for d1oxya1:

Click to download the PDB-style file with coordinates for d1oxya1.
(The format of our PDB-style files is described here.)

Timeline for d1oxya1: