Lineage for d3okjp_ (3okj P:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2224590Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2224591Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2224775Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2224887Protein Proteasome alpha subunit (non-catalytic) [56255] (8 species)
    contains an extension to the common fold at the N-terminus
  7. 2224903Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (193 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 2225164Domain d3okjp_: 3okj P: [183093]
    Other proteins in same PDB: d3okj1_, d3okj2_, d3okjd_, d3okjg_, d3okjh_, d3okji_, d3okjj_, d3okjk_, d3okjl_, d3okjm_, d3okjn_, d3okjr_, d3okju_, d3okjv_, d3okjw_, d3okjx_, d3okjy_, d3okjz_
    automated match to d1g65b_
    complexed with ep9

Details for d3okjp_

PDB Entry: 3okj (more details), 2.7 Å

PDB Description: alpha-keto-aldehyde binding mechanism reveals a novel lead structure motif for proteasome inhibition
PDB Compounds: (P:) Proteasome component Y13

SCOPe Domain Sequences for d3okjp_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3okjp_ d.153.1.4 (P:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d3okjp_:

Click to download the PDB-style file with coordinates for d3okjp_.
(The format of our PDB-style files is described here.)

Timeline for d3okjp_: