Lineage for d3okjc_ (3okj C:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548740Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2548741Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2548925Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2549037Protein Proteasome alpha subunit (non-catalytic) [56255] (9 species)
    contains an extension to the common fold at the N-terminus
  7. 2549053Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (237 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 2549264Domain d3okjc_: 3okj C: [183081]
    Other proteins in same PDB: d3okj1_, d3okj2_, d3okjd_, d3okjg_, d3okjh_, d3okji_, d3okjj_, d3okjk_, d3okjl_, d3okjm_, d3okjn_, d3okjr_, d3okju_, d3okjv_, d3okjw_, d3okjx_, d3okjy_, d3okjz_
    automated match to d1g65c_
    complexed with ep9

Details for d3okjc_

PDB Entry: 3okj (more details), 2.7 Å

PDB Description: alpha-keto-aldehyde binding mechanism reveals a novel lead structure motif for proteasome inhibition
PDB Compounds: (C:) Proteasome component PRE6

SCOPe Domain Sequences for d3okjc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3okjc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d3okjc_:

Click to download the PDB-style file with coordinates for d3okjc_.
(The format of our PDB-style files is described here.)

Timeline for d3okjc_: