SCOPe 2.08: Domain d3nzjq1: 3nzj Q:7-236

Lineage for d3nzjq1 (3nzj Q:7-236)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein automated matches [190144] (14 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187078] (41 PDB entries)

8. Domain d3nzjq1: 3nzj Q:7-236 [182671]
   Other proteins in same PDB: d3nzj1_, d3nzja_, d3nzjc2, d3nzje_, d3nzjf_, d3nzji_, d3nzjj_, d3nzjm_, d3nzjo_, d3nzjq2, d3nzjs_, d3nzjt_, d3nzjw_, d3nzjx_
   automated match to d1g65c_
   complexed with mes

Details for d3nzjq1

PDB Entry: 3nzj, 2.4 Å

PDB Description: Crystal structure of yeast 20S proteasome in complex with ligand 2a

PDB Compounds: (Q:) Proteasome component PRE6

SCOPe Domain Sequences for d3nzjq1:

Sequence; same for both SEQRES and ATOM records:

>d3nzjq1 d.153.1.4 (Q:7-236) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
gydralsifspdghifqveyaleavkrgtcavgvkgkncvvlgcerrstlklqdtritps
kvskidshvvlsfsglnadsriliekarveaqshrltledpvtveyltryvagvqqrytq
sggvrpfgvstliagfdprddepklyqtepsgiysswsaqtigrnsktvrefleknydrk
eppatveecvkltvrsllevvqtgaknieitvvkpdsdivalsseeinqyvtqi

Timeline for d3nzjq1:

• d3nzjq1 first appeared in SCOPe 2.01, called d3nzjq_
  
• d3nzjq1 was called d3nzjq_ in SCOPe 2.07