SCOPe 2.04: Domain d1bnpa_: 1bnp A:

Lineage for d1bnpa_ (1bnp A:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families)
   contains one classic and one pseudo HhH motifs

5. Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)

6. Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
   topologically similar to the second domain

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [47806] (15 PDB entries)

8. Domain d1bnpa_: 1bnp A: [18080]

Details for d1bnpa_

PDB Entry: 1bnp

PDB Description: nmr solution structure of the n-terminal domain of dna polymerase beta, 55 structures

PDB Compounds: (A:) DNA polymerase beta

SCOPe Domain Sequences for d1bnpa_:

Sequence; same for both SEQRES and ATOM records:

>d1bnpa_ a.60.6.1 (A:) DNA polymerase beta, N-terminal (8 kD)-domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
mskrkapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklek

Timeline for d1bnpa_:

• d1bnpa_ first appeared (with stable ids) in SCOP 1.55, called d1bnp__
  
• d1bnpa_ appears in SCOPe 2.03
  
• d1bnpa_ appears in SCOPe 2.05
  
• d1bnpa_ appears in the current release, SCOPe 2.08