Lineage for d1zqka1 (1zqk A:9-91)

  1. Root: SCOP 1.69
  2. 436025Class a: All alpha proteins [46456] (218 folds)
  3. 444234Fold a.60: SAM domain-like [47768] (13 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 444386Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (1 family) (S)
    contains one classic and one pseudo HhH motifs
  5. 444387Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)
  6. 444388Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
    topologically similar to the second domain
  7. 444389Species Human (Homo sapiens) [TaxId:9606] [47805] (92 PDB entries)
  8. 444421Domain d1zqka1: 1zqk A:9-91 [18019]
    Other proteins in same PDB: d1zqka3, d1zqka4

Details for d1zqka1

PDB Entry: 1zqk (more details), 3.2 Å

PDB Description: dna polymerase beta (pol b) (e.c. complexed with seven base pairs of dna; soaked in the presence of kcl (75 millimolar) and mgcl2 (75 millimolar)

SCOP Domain Sequences for d1zqka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zqka1 a.60.6.1 (A:9-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens)}

SCOP Domain Coordinates for d1zqka1:

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Timeline for d1zqka1: