Lineage for d3kydd_ (3kyd D:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2931198Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2931473Protein SUMO-1 (smt3 homologue) [54241] (3 species)
  7. 2931481Species Human (Homo sapiens) [TaxId:9606] [54242] (10 PDB entries)
    Uniprot Q93068
  8. 2931486Domain d3kydd_: 3kyd D: [179807]
    automated match to d1a5ra_
    complexed with edo, vmx, zn

Details for d3kydd_

PDB Entry: 3kyd (more details), 2.61 Å

PDB Description: human sumo e1~sumo1-amp tetrahedral intermediate mimic
PDB Compounds: (D:) Small ubiquitin-related modifier 1

SCOPe Domain Sequences for d3kydd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3kydd_ d.15.1.1 (D:) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]}
eyiklkvigqdsseihfkvkmtthlkklkesycqrqgvpmnslrflfegqriadnhtpke
lgmeeedvievyqeqcg

SCOPe Domain Coordinates for d3kydd_:

Click to download the PDB-style file with coordinates for d3kydd_.
(The format of our PDB-style files is described here.)

Timeline for d3kydd_: