SCOPe 2.05: Domain d1bpya1: 1bpy A:10-91

Lineage for d1bpya1 (1bpy A:10-91)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families)
   contains one classic and one pseudo HhH motifs

5. Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)

6. Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
   topologically similar to the second domain

7. Species Human (Homo sapiens) [TaxId:9606] [47805] (144 PDB entries)
   Uniprot P06746

8. Domain d1bpya1: 1bpy A:10-91 [17980]
   Other proteins in same PDB: d1bpya3, d1bpya4
   protein/DNA complex; complexed with dct, mg, na

Details for d1bpya1

PDB Entry: 1bpy, 2.2 Å

PDB Description: human dna polymerase beta complexed with gapped dna and ddctp

PDB Compounds: (A:) protein (DNA polymerase beta)

SCOPe Domain Sequences for d1bpya1:

Sequence; same for both SEQRES and ATOM records:

>d1bpya1 a.60.6.1 (A:10-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens) [TaxId: 9606]}
tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtki
aekideflatgklrklekirqd

Timeline for d1bpya1:

• d1bpya1 first appeared (with stable ids) in SCOP 1.55
  
• d1bpya1 appears in SCOPe 2.04
  
• d1bpya1 appears in SCOPe 2.06
  
• d1bpya1 appears in the current release, SCOPe 2.08