Lineage for d1bpya1 (1bpy A:10-91)

  1. Root: SCOP 1.65
  2. 275720Class a: All alpha proteins [46456] (179 folds)
  3. 282277Fold a.60: SAM domain-like [47768] (13 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 282385Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (1 family) (S)
    contains one classic and one pseudo HhH motifs
  5. 282386Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (2 proteins)
  6. 282387Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
    topologically similar to the second domain
  7. 282388Species Human (Homo sapiens) [TaxId:9606] [47805] (92 PDB entries)
  8. 282389Domain d1bpya1: 1bpy A:10-91 [17980]
    Other proteins in same PDB: d1bpya3, d1bpya4
    protein/DNA complex; complexed with dct, doc, mg, na

Details for d1bpya1

PDB Entry: 1bpy (more details), 2.2 Å

PDB Description: human dna polymerase beta complexed with gapped dna and ddctp

SCOP Domain Sequences for d1bpya1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bpya1 a.60.6.1 (A:10-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens)}
tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtki
aekideflatgklrklekirqd

SCOP Domain Coordinates for d1bpya1:

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Timeline for d1bpya1: