Lineage for d3kvfa_ (3kvf A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2926589Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2926590Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2927232Family d.3.1.6: Ubiquitin carboxyl-terminal hydrolase UCH-L [54050] (3 proteins)
    automatically mapped to Pfam PF01088
  6. 2927250Protein automated matches [191161] (1 species)
    not a true protein
  7. 2927251Species Human (Homo sapiens) [TaxId:9606] [189359] (4 PDB entries)
  8. 2927255Domain d3kvfa_: 3kvf A: [179735]
    Other proteins in same PDB: d3kvfb_
    automated match to d2etla1
    complexed with gve; mutant

Details for d3kvfa_

PDB Entry: 3kvf (more details), 2.8 Å

PDB Description: crystal structure of the i93m mutant of ubiquitin carboxy terminal hydrolase l1 bound to ubiquitin vinylmethylester
PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase isozyme L1

SCOPe Domain Sequences for d3kvfa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3kvfa_ d.3.1.6 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mqlkpmeinpemlnkvlsrlgvagqwrfvdvlgleeeslgsvpapacallllfpltaqhe
nfrkkqieelkgqevspkvyfmkqtignscgtmglihavannqdklgfedgsvlkqflse
tekmspedrakcfekneaiqaahdavaqegqcrvddkvnfhfilfnnvdghlyeldgrmp
fpvnhgassedtllkdaakvcreftereqgevrfsavalckaa

SCOPe Domain Coordinates for d3kvfa_:

Click to download the PDB-style file with coordinates for d3kvfa_.
(The format of our PDB-style files is described here.)

Timeline for d3kvfa_: