SCOPe 2.07: Domain d3jslb_: 3jsl B:

Lineage for d3jslb_ (3jsl B:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families)
   has a circularly permuted topology

5. Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (2 proteins)
   automatically mapped to Pfam PF01653

6. Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (4 species)
   contains additional, N-terminal all-alpha subdomain

7. Species Staphylococcus aureus [TaxId:1280] [189155] (2 PDB entries)

8. Domain d3jslb_: 3jsl B: [178788]
   automated match to d1b04a_
   complexed with so4

Details for d3jslb_

PDB Entry: 3jsl, 1.8 Å

PDB Description: Crystal structure of the adenylation domain of NAD+-dependent DNA ligase from Staphylococcus aureus

PDB Compounds: (B:) DNA ligase

SCOPe Domain Sequences for d3jslb_:

Sequence; same for both SEQRES and ATOM records:

>d3jslb_ d.142.2.2 (B:) Adenylation domain of NAD+-dependent DNA ligase {Staphylococcus aureus [TaxId: 1280]}
adlssrvnelhdllnqysyeyyvednpsvpdseydkllhelikieeehpeyktvdsptvr
vggeaqasfnkvnhdtpmlslgnafneddlrkfdqrireqignveymcelkidglavslk
yvdgyfvqgltrgdgttgeditenlktihaiplkmkeplnvevrgeaymprrsflrlnee
kekndeqlfanprnaaagslrqldskltakrklsvfiysvndftdfnarsqsealdeldk
lgfttnknrarvnnidgvleyiekwtsqreslpydidgivikvndldqqdemgftqkspr
waiaykfp

Timeline for d3jslb_:

• d3jslb_ first appeared in SCOPe 2.01
  
• d3jslb_ appears in SCOPe 2.06
  
• d3jslb_ appears in the current release, SCOPe 2.08