Lineage for d3gpt1_ (3gpt 1:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2224590Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2224591Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2224775Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2226421Protein Proteasome beta subunit (catalytic) [56252] (6 species)
  7. 2226430Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (174 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 2226462Domain d3gpt1_: 3gpt 1: [176847]
    Other proteins in same PDB: d3gpta_, d3gptb_, d3gptc_, d3gpte_, d3gptf_, d3gptg_, d3gpto_, d3gptp_, d3gptq_, d3gpts_, d3gptt_, d3gptu_
    automated match to d1g0u1_
    complexed with gpt

Details for d3gpt1_

PDB Entry: 3gpt (more details), 2.41 Å

PDB Description: Crystal structure of the yeast 20S proteasome in complex with Salinosporamide derivatives: slow substrate ligand
PDB Compounds: (1:) Proteasome component PRE4

SCOPe Domain Sequences for d3gpt1_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3gpt1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tqqpivtgtsvismkydngviiaadnlgsygsllrfngverlipvgdntvvgisgdisdm
qhierllkdlvtenaydnpladaeealepsyifeylatvmyqrrskmnplwnaiivagvq
sngdqflryvnllgvtyssptlatgfgahmanpllrkvvdresdipkttvqvaeeaivna
mrvlyyrdarssrnfslaiidkntgltfkknlqvenmkwdfakdikgygtqki

SCOPe Domain Coordinates for d3gpt1_:

Click to download the PDB-style file with coordinates for d3gpt1_.
(The format of our PDB-style files is described here.)

Timeline for d3gpt1_: