Lineage for d3gpja_ (3gpj A:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1222614Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1222615Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1222781Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 1222883Protein Proteasome alpha subunit (non-catalytic) [56255] (6 species)
    contains an extension to the common fold at the N-terminus
  7. 1222899Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (37 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 1223159Domain d3gpja_: 3gpj A: [176819]
    Other proteins in same PDB: d3gpj1_, d3gpj2_, d3gpjd_, d3gpjg_, d3gpjh_, d3gpji_, d3gpjj_, d3gpjk_, d3gpjl_, d3gpjm_, d3gpjn_, d3gpjr_, d3gpju_, d3gpjv_, d3gpjw_, d3gpjx_, d3gpjy_, d3gpjz_
    automated match to d1g65a_
    complexed with sy2

Details for d3gpja_

PDB Entry: 3gpj (more details), 2.7 Å

PDB Description: Crystal structure of the yeast 20S proteasome in complex with syringolin B
PDB Compounds: (A:) Proteasome component Y7

SCOPe Domain Sequences for d3gpja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3gpja_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d3gpja_:

Click to download the PDB-style file with coordinates for d3gpja_.
(The format of our PDB-style files is described here.)

Timeline for d3gpja_: