SCOPe 2.07: Domain d3gbma1: 3gbm A:11-324

Lineage for d3gbma1 (3gbm A:11-324)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (19 species)
   includes rudiment esterase domain

7. Species Influenza A virus (a/viet nam/1203/2004(h5n1)) [TaxId:284218] [190025] (2 PDB entries)

8. Domain d3gbma1: 3gbm A:11-324 [176502]
   Other proteins in same PDB: d3gbma2, d3gbmb1, d3gbmb2, d3gbmc2, d3gbmd_, d3gbml1, d3gbml2, d3gbmm1, d3gbmm2
   automated match to d2fk0a1
   complexed with bma, edo, gol, nag

Details for d3gbma1

PDB Entry: 3gbm, 2.7 Å

PDB Description: crystal structure of fab cr6261 in complex with a h5n1 influenza virus hemagglutinin.

PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d3gbma1:

Sequence; same for both SEQRES and ATOM records:

>d3gbma1 b.19.1.2 (A:11-324) Hemagglutinin {Influenza A virus (a/viet nam/1203/2004(h5n1)) [TaxId: 284218]}
dqicigyhannsteqvdtimeknvtvthaqdilekkhngklcdldgvkplilrdcsvagw
llgnpmcdefinvpewsyivekanpvndlcypgdfndyeelkhllsrinhfekiqiipks
swssheaslgvssacpyqgkssffrnvvwlikknstyptikrsynntnqedllvlwgihh
pndaaeqtklyqnpttyisvgtstlnqrlvpriatrskvngqsgrmeffwtilkpndain
fesngnfiapeyaykivkkgdstimkseleygncntkcqtpmgainssmpfhnihpltig
ecpkyvksnrlvlatglrnsp

Timeline for d3gbma1:

• d3gbma1 first appeared in SCOPe 2.01, called d3gbma_
  
• d3gbma1 appears in SCOPe 2.06
  
• d3gbma1 appears in the current release, SCOPe 2.08