SCOPe 2.04: Domain d3cogb_: 3cog B:

Lineage for d3cogb_ (3cog B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (83 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188446] (17 PDB entries)

8. Domain d3cogb_: 3cog B: [173375]
   automated match to d1n8pa_
   complexed with 2ag, gol, no3, peg, plp

Details for d3cogb_

PDB Entry: 3cog, 2 Å

PDB Description: Crystal structure of human cystathionase (Cystathionine gamma lyase) in complex with DL-propargylglycine

PDB Compounds: (B:) Cystathionine gamma-lyase

SCOPe Domain Sequences for d3cogb_:

Sequence, based on SEQRES records:

>d3cogb_ c.67.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gflphfqhfatqaihvgqdpeqwtsravvppislsttfkqgapgqhsgfeysrsgnptrn
clekavaaldgakyclafasglaatvtithllkagdqiicmddvyggtnryfrqvasefg
lkisfvdcskiklleaaitpetklvwietptnptqkvidiegcahivhkhgdiilvvdnt
fmspyfqrplalgadismysatkymnghsdvvmglvsvnceslhnrlrflqnslgavpsp
idcylcnrglktlhvrmekhfkngmavaqflesnpwvekviypglpshpqhelvkrqctg
ctgmvtfyikgtlqhaeiflknlklftlaeslggfeslaelpaimthasvlkndrdvlgi
sdtlirlsvgledeedlledldqalkaahpp

Sequence, based on observed residues (ATOM records):

>d3cogb_ c.67.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gflphfqhfatqaihvgqdpeqwtsravvppislsttfkqgapgqhsgfeysrsgnptrn
clekavaaldgakyclafasglaatvtithllkagdqiicmddvyggtnryfrqvasefg
lkisfvdcskiklleaaitpetklvwietptnptqkvidiegcahivhkhgdiilvvdnt
fmspyfqrplalgadismysatkymnghsdvvmglvsvnceslhnrlrflqnslgavpsp
idcylcnrglktlhvrmekhfkngmavaqflesnpwvekviypglpshpqhelvkrqctg
ctgmvtfyikgtlqhaeiflknlklftlaeslggfeslaelpsdtlirlsvgledeedll
edldqalkaahpp

Timeline for d3cogb_:

• d3cogb_ first appeared in SCOPe 2.01
  
• d3cogb_ appears in SCOPe 2.03
  
• d3cogb_ appears in SCOPe 2.05
  
• d3cogb_ appears in the current release, SCOPe 2.08