SCOPe 2.04: Domain d3cdpa_: 3cdp A:

Lineage for d3cdpa_ (3cdp A:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187214] (126 PDB entries)

8. Domain d3cdpa_: 3cdp A: [173160]
   automated match to d1nyxa_
   protein/DNA complex; complexed with yrg

Details for d3cdpa_

PDB Entry: 3cdp, 2.8 Å

PDB Description: Crystal structure of PPAR-gamma LBD complexed with a partial agonist, analogue of clofibric acid

PDB Compounds: (A:) Peroxisome proliferator-activated receptor gamma

SCOPe Domain Sequences for d3cdpa_:

Sequence; same for both SEQRES and ATOM records:

>d3cdpa_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfkh
itplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheii
ytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlai
fiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqiv
tehvqllqvikktetdmslhpllqeiykdl

Timeline for d3cdpa_:

• d3cdpa_ first appeared in SCOPe 2.01
  
• d3cdpa_ appears in SCOPe 2.03
  
• d3cdpa_ appears in SCOPe 2.05
  
• d3cdpa_ appears in the current release, SCOPe 2.08