SCOPe 2.08: Domain d3apgb1: 3apg B:2-471

Lineage for d3apgb1 (3apg B:2-471)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (6 proteins)

6. Protein automated matches [190245] (12 species)
   not a true protein

7. Species Pyrococcus furiosus [TaxId:2261] [189762] (2 PDB entries)

8. Domain d3apgb1: 3apg B:2-471 [172297]
   Other proteins in same PDB: d3apga2, d3apgb2, d3apgc2, d3apgd2
   automated match to d1qvba_
   complexed with gol

Details for d3apgb1

PDB Entry: 3apg, 2.35 Å

PDB Description: crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus

PDB Compounds: (B:) Beta-glucosidase

SCOPe Domain Sequences for d3apgb1:

Sequence; same for both SEQRES and ATOM records:

>d3apgb1 c.1.8.4 (B:2-471) automated matches {Pyrococcus furiosus [TaxId: 2261]}
kfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywhly
kqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikeleki
anmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldektv
vefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfnli
qahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkldw
igvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllkyln
nayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewaqg
frmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtr

Timeline for d3apgb1:

• d3apgb1 first appeared in SCOPe 2.01, called d3apgb_
  
• d3apgb1 appears in SCOPe 2.07