SCOPe 2.01: Domain d2zzpa_: 2zzp A:

Lineage for d2zzpa_ (2zzp A:)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (23 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.22: Autophagin-like [159858] (3 proteins)
   Pfam PF03416

6. Protein automated matches [190846] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188165] (2 PDB entries)

8. Domain d2zzpa_: 2zzp A: [171615]
   Other proteins in same PDB: d2zzpb_
   automated match to d2z0da1

Details for d2zzpa_

PDB Entry: 2zzp, 2.05 Å

PDB Description: the crystal structure of human atg4b(c74s)- lc3(1-124) complex

PDB Compounds: (A:) Cysteine protease ATG4B

SCOPe Domain Sequences for d2zzpa_:

Sequence, based on SEQRES records:

>d2zzpa_ d.3.1.22 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ltydtlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaiggtg
ptsdtgwgsmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyysi
hqiaqmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlcrt
svpcagatafpadsdrhcngfpagaevtnrpspwrplvlliplrlgltdineayvetlkh
cfmmpqslgviggkpnsahyfigyvgeeliyldphttqpaveptdgcfipdesfhcqhpp
crmsiaeldpsiavgffckteddfndwcqqvkklsllggalpmfelveq

Sequence, based on observed residues (ATOM records):

>d2zzpa_ d.3.1.22 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ltydtlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaiggtg
ptsdtgwgsmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyysi
hqiaqmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlcrt
spwrplvlliplrlgltdineayvetlkhcfmmpqslgviggkpnsahyfigyvgeeliy
ldphttqpavepipdesfhcqhppcrmsiaeldpsiavgffckteddfndwcqqvkklsl
lalpmfelveq

Timeline for d2zzpa_:

• d2zzpa_ is new in SCOPe 2.01-stable
  
• d2zzpa_ appears in SCOPe 2.02
  
• d2zzpa_ appears in the current release, SCOPe 2.08