SCOPe 2.07: Domain d2pida_: 2pid A:

Lineage for d2pida_ (2pid A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.0: automated matches [191377] (1 protein)
   not a true family

6. Protein automated matches [190459] (59 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188230] (4 PDB entries)

8. Domain d2pida_: 2pid A: [167192]
   automated match to d1tyae_
   protein/RNA complex; complexed with ysa

Details for d2pida_

PDB Entry: 2pid, 2.2 Å

PDB Description: Crystal structure of human mitochondrial tyrosyl-tRNA synthetase in complex with an adenylate analog

PDB Compounds: (A:) Tyrosyl-tRNA synthetase

SCOPe Domain Sequences for d2pida_:

Sequence, based on SEQRES records:

>d2pida_ c.26.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gllaaqkarglfkdffpetgtkielpelfdrgtasfpqtiycgfdptadslhvghllall
glfhlqraghnvialvggatarlgdpsgrtkerealetervranaralrlglealaanhq
qlftdgrswgsftvldnsawyqkqhlvdflaavgghfrmgtllsrqsvqlrlkspegmsl
aeffyqvlqaydfyylfqrygcrvqlggsdqlgnimsgyefinkltgedvfgitvplits
ttgaklgksagnavwlnrdktspfelyqffvrqpddsverylklftflplpeidhimqlh
vkeperrgpqkrlaaevtklvhgregldsakrctqal

Sequence, based on observed residues (ATOM records):

>d2pida_ c.26.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gllaaqkarglfkdffpetgtkielpelfpqtiycgfdptadslhvghllallglfhlqr
aghnvialvggatarlgdpsgrtkerealetervranaralrlglealaanhqqlftdgr
swgsftvldnsawyqkqhlvdflaavgghfrmgtllsrqsvqlrlkspegmslaeffyqv
lqaydfyylfqrygcrvqlggsdqlgnimsgyefinkltgedvfgitvplitavwlnrdk
tspfelyqffvrqpddsverylklftflplpeidhimqlhvkeperrgpqkrlaaevtkl
vhgregldsakrctqal

Timeline for d2pida_:

• d2pida_ first appeared in SCOPe 2.01
  
• d2pida_ appears in SCOPe 2.06
  
• d2pida_ appears in the current release, SCOPe 2.08