SCOPe 2.03: Domain d1yf6m_: 1yf6 M:

Lineage for d1yf6m_ (1yf6 M:)

1. Root: SCOPe 2.03

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
   five transmembrane helices forming a sheet-like structure

4. Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family)
   automatically mapped to Pfam PF00124

5. Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 proteins)
   L and M are probably related to each other

6. Protein M (medium) subunit [81481] (3 species)

7. Species Rhodobacter sphaeroides [TaxId:1063] [81479] (55 PDB entries)
   Uniprot P02953

8. Domain d1yf6m_: 1yf6 M: [162190]
   Other proteins in same PDB: d1yf6h1, d1yf6h2, d1yf6l_
   automated match to d1ystm_
   complexed with bcl, bph, cdl, cl, fe2, gol, hto, lda, po4, spo, u10; mutant

Details for d1yf6m_

PDB Entry: 1yf6, 2.25 Å

PDB Description: structure of a quintuple mutant of photosynthetic reaction center from rhodobacter sphaeroides

PDB Compounds: (M:) reaction center protein m chain

SCOPe Domain Sequences for d1yf6m_:

Sequence; same for both SEQRES and ATOM records:

>d1yf6m_ f.26.1.1 (M:) M (medium) subunit {Rhodobacter sphaeroides [TaxId: 1063]}
aeyqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlsl
fsglmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasf
fmfvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygif
shldwtnnfslvhgnlfynpfhdlsiaflfgsahlfamhgatilavsrfggereleqiad
rgtaaeraalfwrwtmgfnwtmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqn
h

Timeline for d1yf6m_:

• d1yf6m_ first appeared in SCOPe 2.01
  
• d1yf6m_ appears in SCOPe 2.02
  
• d1yf6m_ appears in SCOPe 2.04
  
• d1yf6m_ appears in the current release, SCOPe 2.08