SCOPe 2.05: Protein: 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP

Lineage for Protein: 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (10 families)
Family d.142.1.9: PurP ATP-binding domain-like [160804] (1 protein)
Pfam PF06973; DUF1297
Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP [160805] (3 species)

Species:

Methanocaldococcus jannaschii [TaxId:2190] [160807] (4 PDB entries)
Uniprot Q57600 124-361
1. Domain for 2r7k:
  - Domain d2r7ka2: 2r7k A:124-361 [151648]
    Other proteins in same PDB: d2r7ka1
    complexed with acp, amz, cl, so4
2. Domain for 2r7l:
  - Domain d2r7la2: 2r7l A:124-361 [151650]
    Other proteins in same PDB: d2r7la1
    automated match to d2r7ka2
    complexed with amz, atp, cl, so4
3. Domain for 2r7m:
  - Domain d2r7ma2: 2r7m A:124-361 [151652]
    Other proteins in same PDB: d2r7ma1
    automated match to d2r7ka2
    complexed with amp, cl, so4
4. Domain for 2r7n:
  - Domain d2r7na2: 2r7n A:124-361 [151654]
    Other proteins in same PDB: d2r7na1
    automated match to d2r7ka2
    complexed with adp, cl, fai, so4
Pyrococcus furiosus [TaxId:2261] [160808] (4 PDB entries)
Uniprot Q8U0R7 100-334
1. Domains for 2r84:
  1. Domain d2r84a2: 2r84 A:100-334 [151673]
    Other proteins in same PDB: d2r84a1, d2r84b1
    complexed with amp, amz, cl, mpd, na
  2. Domain d2r84b2: 2r84 B:100-334 [151675]
    Other proteins in same PDB: d2r84a1, d2r84b1
    automated match to d2r84a2
    complexed with amp, amz, cl, mpd, na
2. Domains for 2r85:
  1. Domain d2r85a2: 2r85 A:100-334 [151677]
    Other proteins in same PDB: d2r85a1, d2r85b1
    automated match to d2r84a2
    complexed with amp, cl, mpd, na
  2. Domain d2r85b2: 2r85 B:100-334 [151679]
    Other proteins in same PDB: d2r85a1, d2r85b1
    automated match to d2r84a2
    complexed with amp, cl, mpd, na
3. Domains for 2r86:
  1. Domain d2r86a2: 2r86 A:100-334 [151681]
    Other proteins in same PDB: d2r86a1, d2r86b1
    automated match to d2r84a2
    complexed with atp, mpd, na, po4
  2. Domain d2r86b2: 2r86 B:100-334 [151683]
    Other proteins in same PDB: d2r86a1, d2r86b1
    automated match to d2r84a2
    complexed with atp, mpd, na, po4
4. Domains for 2r87:
  1. Domain d2r87a2: 2r87 A:100-334 [151685]
    Other proteins in same PDB: d2r87a1, d2r87b1, d2r87c1, d2r87d1, d2r87e1, d2r87f1
    automated match to d2r84a2
    complexed with adp, po4
  2. Domain d2r87b2: 2r87 B:100-334 [151687]
    Other proteins in same PDB: d2r87a1, d2r87b1, d2r87c1, d2r87d1, d2r87e1, d2r87f1
    automated match to d2r84a2
    complexed with adp, po4
  3. Domain d2r87c2: 2r87 C:100-334 [151689]
    Other proteins in same PDB: d2r87a1, d2r87b1, d2r87c1, d2r87d1, d2r87e1, d2r87f1
    automated match to d2r84a2
    complexed with adp, po4
  4. Domain d2r87d2: 2r87 D:100-334 [151691]
    Other proteins in same PDB: d2r87a1, d2r87b1, d2r87c1, d2r87d1, d2r87e1, d2r87f1
    automated match to d2r84a2
    complexed with adp, po4
  5. Domain d2r87e2: 2r87 E:100-334 [151693]
    Other proteins in same PDB: d2r87a1, d2r87b1, d2r87c1, d2r87d1, d2r87e1, d2r87f1
    automated match to d2r84a2
    complexed with adp, po4
  6. Domain d2r87f2: 2r87 F:100-334 [151695]
    Other proteins in same PDB: d2r87a1, d2r87b1, d2r87c1, d2r87d1, d2r87e1, d2r87f1
    automated match to d2r84a2
    complexed with adp, po4
Thermococcus kodakaraensis [TaxId:311400] [160806] (1 PDB entry)
Uniprot Q5JD28 98-310
- Domains for 2pbz:
  1. Domain d2pbza2: 2pbz A:100-312 [149372]
    Other proteins in same PDB: d2pbza1, d2pbzb1, d2pbzc1
    complexed with atp
  2. Domain d2pbzb2: 2pbz B:100-312 [149374]
    Other proteins in same PDB: d2pbza1, d2pbzb1, d2pbzc1
    automated match to d2pbza2
    complexed with atp
  3. Domain d2pbzc2: 2pbz C:100-312 [149376]
    Other proteins in same PDB: d2pbza1, d2pbzb1, d2pbzc1
    automated match to d2pbza2
    complexed with atp

More info for Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from d.142.1.9: PurP ATP-binding domain-like

Timeline for Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from d.142.1.9: PurP ATP-binding domain-like:

Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from d.142.1.9: PurP ATP-binding domain-like first appeared in SCOP 1.75
Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from d.142.1.9: PurP ATP-binding domain-like appears in SCOPe 2.04
Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from d.142.1.9: PurP ATP-binding domain-like appears in SCOPe 2.06
Protein 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP from d.142.1.9: PurP ATP-binding domain-like appears in the current release, SCOPe 2.08