Lineage for Protein: GGDEF family protein VP0354
- Root: SCOPe 2.03
Class d: Alpha and beta proteins (a+b) [53931] (376 folds) 
Fold d.110: Profilin-like [55769] (10 superfamilies)
core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
Superfamily d.110.6: Sensory domain-like [103190] (3 families) 
alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain
Family d.110.6.2: YkuI C-terminal domain-like [143732] (2 proteins)
PfamB PB021678Protein GGDEF family protein VP0354 [160677] (1 species)
N-terminal region, consist of two sensory domain-like domains; there is a canonical sensory (PAS) domain in the middle region
Species:
Vibrio parahaemolyticus [TaxId:670] [160678] (3 PDB entries)
Uniprot Q87SR8 207-299! Uniprot Q87SR8 35-206- Domains for 2p7j:
Domain d2p7ja1: 2p7j A:181-273 [149287]
complexed with acy, na, so4
Domain d2p7ja2: 2p7j A:9-180 [149288]
complexed with acy, na, so4
Domain d2p7jb1: 2p7j B:181-281 [149289]
automated match to d2p7ja1
complexed with acy, na, so4
Domain d2p7jb2: 2p7j B:8-180 [149290]
automated match to d2p7ja2
complexed with acy, na, so4
- Domains for 3lid:
Domain d3lida1: 3lid A:33-206 [232842]
automated match to d2p7jb2
complexed with cl, edo, po4
Domain d3lida2: 3lid A:207-311 [232845]
automated match to d2p7jb1
complexed with cl, edo, po4
- Domains for 3lie:
Domain d3liea1: 3lie A:30-206 [232843]
automated match to d2p7jb2
complexed with mg
Domain d3liea2: 3lie A:207-302 [232844]
automated match to d2p7jb1
complexed with mg
- Domains for 2p7j:
More info for Protein GGDEF family protein VP0354 from d.110.6.2: YkuI C-terminal domain-like
Timeline for Protein GGDEF family protein VP0354 from d.110.6.2: YkuI C-terminal domain-like:
- Protein GGDEF family protein VP0354 from d.110.6.2: YkuI C-terminal domain-like first appeared in SCOP 1.75
- Protein GGDEF family protein VP0354 from d.110.6.2: YkuI C-terminal domain-like appears in SCOPe 2.02
- Protein GGDEF family protein VP0354 from d.110.6.2: YkuI C-terminal domain-like appears in SCOPe 2.04
- Protein GGDEF family protein VP0354 from d.110.6.2: YkuI C-terminal domain-like last appears in SCOPe 2.07