SCOPe 2.01: Protein: Beta-mannosidase, domains 2, 4 and 5

Lineage for Protein: Beta-mannosidase, domains 2, 4 and 5

Root: SCOPe 2.01
Class b: All beta proteins [48724] (174 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.4: beta-Galactosidase/glucuronidase domain [49303] (1 family)
Family b.1.4.1: beta-Galactosidase/glucuronidase domain [49304] (4 proteins)
Protein Beta-mannosidase, domains 2, 4 and 5 [158905] (1 species)
truncated domain 5 lacks the last strand

Species:

Bacteroides thetaiotaomicron [TaxId:818] [158906] (9 PDB entries)
Uniprot Q8AAK6 220-330! Uniprot Q8AAK6 679-783! Uniprot Q8AAK6 784-864
1. Domains for 2je8:
  1. Domain d2je8a1: 2je8 A:220-330 [147998]
    Other proteins in same PDB: d2je8a4, d2je8a5, d2je8b4, d2je8b5
    complexed with b3p, cl, gol
  2. Domain d2je8a2: 2je8 A:784-864 [147999]
    Other proteins in same PDB: d2je8a4, d2je8a5, d2je8b4, d2je8b5
    complexed with b3p, cl, gol
  3. Domain d2je8a3: 2je8 A:679-783 [148000]
    Other proteins in same PDB: d2je8a4, d2je8a5, d2je8b4, d2je8b5
    complexed with b3p, cl, gol
  4. Domain d2je8b1: 2je8 B:220-330 [148003]
    Other proteins in same PDB: d2je8a4, d2je8a5, d2je8b4, d2je8b5
    automatically matched to 2JE8 A:220-330
    complexed with b3p, cl, gol
  5. Domain d2je8b2: 2je8 B:784-864 [148004]
    Other proteins in same PDB: d2je8a4, d2je8a5, d2je8b4, d2je8b5
    automatically matched to 2JE8 A:784-864
    complexed with b3p, cl, gol
  6. Domain d2je8b3: 2je8 B:679-783 [148005]
    Other proteins in same PDB: d2je8a4, d2je8a5, d2je8b4, d2je8b5
    automatically matched to 2JE8 A:679-783
    complexed with b3p, cl, gol
2. Domains for 2vjx:
  1. Domain d2vjxa1: 2vjx A:220-330 [153203]
    Other proteins in same PDB: d2vjxa4, d2vjxa5, d2vjxb4, d2vjxb5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, ifl
  2. Domain d2vjxa2: 2vjx A:784-864 [153204]
    Other proteins in same PDB: d2vjxa4, d2vjxa5, d2vjxb4, d2vjxb5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, ifl
  3. Domain d2vjxa3: 2vjx A:679-783 [153205]
    Other proteins in same PDB: d2vjxa4, d2vjxa5, d2vjxb4, d2vjxb5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, ifl
  4. Domain d2vjxb1: 2vjx B:220-330 [153208]
    Other proteins in same PDB: d2vjxa4, d2vjxa5, d2vjxb4, d2vjxb5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, ifl
  5. Domain d2vjxb2: 2vjx B:784-864 [153209]
    Other proteins in same PDB: d2vjxa4, d2vjxa5, d2vjxb4, d2vjxb5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, ifl
  6. Domain d2vjxb3: 2vjx B:679-783 [153210]
    Other proteins in same PDB: d2vjxa4, d2vjxa5, d2vjxb4, d2vjxb5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, ifl
3. Domains for 2vl4:
  1. Domain d2vl4a1: 2vl4 A:220-330 [153254]
    Other proteins in same PDB: d2vl4a4, d2vl4a5, d2vl4b4, d2vl4b5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, mnm
  2. Domain d2vl4a2: 2vl4 A:784-864 [153255]
    Other proteins in same PDB: d2vl4a4, d2vl4a5, d2vl4b4, d2vl4b5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, mnm
  3. Domain d2vl4a3: 2vl4 A:679-783 [153256]
    Other proteins in same PDB: d2vl4a4, d2vl4a5, d2vl4b4, d2vl4b5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, mnm
  4. Domain d2vl4b1: 2vl4 B:220-330 [153259]
    Other proteins in same PDB: d2vl4a4, d2vl4a5, d2vl4b4, d2vl4b5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, mnm
  5. Domain d2vl4b2: 2vl4 B:784-864 [153260]
    Other proteins in same PDB: d2vl4a4, d2vl4a5, d2vl4b4, d2vl4b5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, mnm
  6. Domain d2vl4b3: 2vl4 B:679-783 [153261]
    Other proteins in same PDB: d2vl4a4, d2vl4a5, d2vl4b4, d2vl4b5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, mnm
4. Domains for 2vmf:
  1. Domain d2vmfa1: 2vmf A:220-330 [153316]
    Other proteins in same PDB: d2vmfa4, d2vmfa5, d2vmfb4, d2vmfb5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, mvl
  2. Domain d2vmfa2: 2vmf A:784-864 [153317]
    Other proteins in same PDB: d2vmfa4, d2vmfa5, d2vmfb4, d2vmfb5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, mvl
  3. Domain d2vmfa3: 2vmf A:679-783 [153318]
    Other proteins in same PDB: d2vmfa4, d2vmfa5, d2vmfb4, d2vmfb5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, mvl
  4. Domain d2vmfb1: 2vmf B:220-330 [153321]
    Other proteins in same PDB: d2vmfa4, d2vmfa5, d2vmfb4, d2vmfb5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, mvl
  5. Domain d2vmfb2: 2vmf B:784-864 [153322]
    Other proteins in same PDB: d2vmfa4, d2vmfa5, d2vmfb4, d2vmfb5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, mvl
  6. Domain d2vmfb3: 2vmf B:679-783 [153323]
    Other proteins in same PDB: d2vmfa4, d2vmfa5, d2vmfb4, d2vmfb5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, mvl
5. Domains for 2vo5:
  1. Domain d2vo5a1: 2vo5 A:220-330 [153350]
    Other proteins in same PDB: d2vo5a4, d2vo5a5, d2vo5b4, d2vo5b5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, vbz
  2. Domain d2vo5a2: 2vo5 A:784-864 [153351]
    Other proteins in same PDB: d2vo5a4, d2vo5a5, d2vo5b4, d2vo5b5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, vbz
  3. Domain d2vo5a3: 2vo5 A:679-783 [153352]
    Other proteins in same PDB: d2vo5a4, d2vo5a5, d2vo5b4, d2vo5b5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, vbz
  4. Domain d2vo5b1: 2vo5 B:220-330 [153355]
    Other proteins in same PDB: d2vo5a4, d2vo5a5, d2vo5b4, d2vo5b5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, vbz
  5. Domain d2vo5b2: 2vo5 B:784-864 [153356]
    Other proteins in same PDB: d2vo5a4, d2vo5a5, d2vo5b4, d2vo5b5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, vbz
  6. Domain d2vo5b3: 2vo5 B:679-783 [153357]
    Other proteins in same PDB: d2vo5a4, d2vo5a5, d2vo5b4, d2vo5b5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, vbz
6. Domains for 2vot:
  1. Domain d2vota1: 2vot A:220-330 [153379]
    Other proteins in same PDB: d2vota4, d2vota5, d2votb4, d2votb5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, nhv
  2. Domain d2vota2: 2vot A:784-864 [153380]
    Other proteins in same PDB: d2vota4, d2vota5, d2votb4, d2votb5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, nhv
  3. Domain d2vota3: 2vot A:679-783 [153381]
    Other proteins in same PDB: d2vota4, d2vota5, d2votb4, d2votb5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, nhv
  4. Domain d2votb1: 2vot B:220-330 [153384]
    Other proteins in same PDB: d2vota4, d2vota5, d2votb4, d2votb5
    automatically matched to 2JE8 A:220-330
    complexed with br, cl, edo, nhv
  5. Domain d2votb2: 2vot B:784-864 [153385]
    Other proteins in same PDB: d2vota4, d2vota5, d2votb4, d2votb5
    automatically matched to 2JE8 A:784-864
    complexed with br, cl, edo, nhv
  6. Domain d2votb3: 2vot B:679-783 [153386]
    Other proteins in same PDB: d2vota4, d2vota5, d2votb4, d2votb5
    automatically matched to 2JE8 A:679-783
    complexed with br, cl, edo, nhv
7. Domains for 2vqt:
  1. Domain d2vqta1: 2vqt A:220-330 [153469]
    Other proteins in same PDB: d2vqta4, d2vqta5, d2vqtb4, d2vqtb5
    automatically matched to 2JE8 A:220-330
    complexed with 15a, br, cl, edo
  2. Domain d2vqta2: 2vqt A:784-864 [153470]
    Other proteins in same PDB: d2vqta4, d2vqta5, d2vqtb4, d2vqtb5
    automatically matched to 2JE8 A:784-864
    complexed with 15a, br, cl, edo
  3. Domain d2vqta3: 2vqt A:679-783 [153471]
    Other proteins in same PDB: d2vqta4, d2vqta5, d2vqtb4, d2vqtb5
    automatically matched to 2JE8 A:679-783
    complexed with 15a, br, cl, edo
  4. Domain d2vqtb1: 2vqt B:220-330 [153474]
    Other proteins in same PDB: d2vqta4, d2vqta5, d2vqtb4, d2vqtb5
    automatically matched to 2JE8 A:220-330
    complexed with 15a, br, cl, edo
  5. Domain d2vqtb2: 2vqt B:784-864 [153475]
    Other proteins in same PDB: d2vqta4, d2vqta5, d2vqtb4, d2vqtb5
    automatically matched to 2JE8 A:784-864
    complexed with 15a, br, cl, edo
  6. Domain d2vqtb3: 2vqt B:679-783 [153476]
    Other proteins in same PDB: d2vqta4, d2vqta5, d2vqtb4, d2vqtb5
    automatically matched to 2JE8 A:679-783
    complexed with 15a, br, cl, edo
8. Domains for 2vqu:
  1. Domain d2vqua1: 2vqu A:679-783 [153479]
    Other proteins in same PDB: d2vqua4, d2vqua5, d2vqub4, d2vqub5
    complexed with br, cl, edo, noy
  2. Domain d2vqua2: 2vqu A:220-330 [153480]
    Other proteins in same PDB: d2vqua4, d2vqua5, d2vqub4, d2vqub5
    complexed with br, cl, edo, noy
  3. Domain d2vqua3: 2vqu A:784-864 [153481]
    Other proteins in same PDB: d2vqua4, d2vqua5, d2vqub4, d2vqub5
    complexed with br, cl, edo, noy
  4. Domain d2vqub1: 2vqu B:679-783 [153484]
    Other proteins in same PDB: d2vqua4, d2vqua5, d2vqub4, d2vqub5
    automatically matched to 2VQU A:679-783
    complexed with br, cl, edo, noy
  5. Domain d2vqub2: 2vqu B:220-330 [153485]
    Other proteins in same PDB: d2vqua4, d2vqua5, d2vqub4, d2vqub5
    automatically matched to 2VQU A:220-330
    complexed with br, cl, edo, noy
  6. Domain d2vqub3: 2vqu B:784-864 [153486]
    Other proteins in same PDB: d2vqua4, d2vqua5, d2vqub4, d2vqub5
    automatically matched to 2VQU A:784-864
    complexed with br, cl, edo, noy
9. Domains for 2vr4:
  1. Domain d2vr4a1: 2vr4 A:220-330 [153495]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:220-330
    complexed with 17b, br, cl, edo
  2. Domain d2vr4a2: 2vr4 A:784-864 [153496]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:784-864
    complexed with 17b, br, cl, edo
  3. Domain d2vr4a3: 2vr4 A:679-783 [153497]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:679-783
    complexed with 17b, br, cl, edo
  4. Domain d2vr4b1: 2vr4 B:220-330 [153500]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:220-330
    complexed with 17b, br, cl, edo
  5. Domain d2vr4b2: 2vr4 B:784-864 [153501]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:784-864
    complexed with 17b, br, cl, edo
  6. Domain d2vr4b3: 2vr4 B:679-783 [153502]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:679-783
    complexed with 17b, br, cl, edo

More info for Protein Beta-mannosidase, domains 2, 4 and 5 from b.1.4.1: beta-Galactosidase/glucuronidase domain

Timeline for Protein Beta-mannosidase, domains 2, 4 and 5 from b.1.4.1: beta-Galactosidase/glucuronidase domain:

Protein Beta-mannosidase, domains 2, 4 and 5 from b.1.4.1: beta-Galactosidase/glucuronidase domain first appeared in SCOP 1.75
Protein Beta-mannosidase, domains 2, 4 and 5 from b.1.4.1: beta-Galactosidase/glucuronidase domain appears in SCOPe 2.02
Protein Beta-mannosidase, domains 2, 4 and 5 from b.1.4.1: beta-Galactosidase/glucuronidase domain appears in the current release, SCOPe 2.08