SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family a.60.12.2: PsbU-like

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1999483Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1999718Family a.60.12.2: PsbU-like [158539] (2 protein domains)
    Pfam PF06514

Protein Domains:

  1. 1999719Photosystem II 12 kDa extrinsic protein PsbU [158540] (2 species)
    1. 1999720Species Thermosynechococcus elongatus [TaxId:146786] [158541] (2 PDB entries)
      Uniprot Q9F1L5 37-134
    2. 1999722Species Thermosynechococcus vulcanus [TaxId:32053] [189920] (6 PDB entries)
  2. 1999729automated matches [191005] (3 species)
    not a true protein
    1. 1999730Species Thermosynechococcus elongatus [TaxId:197221] [260559] (4 PDB entries)
    2. 1999732Species Thermosynechococcus elongatus [TaxId:32046] [188750] (2 PDB entries)
    3. 2286095Species Thermosynechococcus vulcanus [TaxId:32053] [329396] (2 PDB entries)

More info for Family a.60.12.2: PsbU-like

Timeline for Family a.60.12.2: PsbU-like: