Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1996349Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 1996350Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 1996818Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
    Duplication: made with two pairs of EF-hands
  6. 1996875Protein Calmodulin [47516] (12 species)
  7. 1997149Species Norway rat (Rattus norvegicus) [TaxId:10116] [158477] (17 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1g4y:
  2. Domain(s) for 1niw:
    1. 1997160Domain d1niwa_: 1niw A: [80537]
      complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
      complexed with ca, edo, so4
    2. 1997161Domain d1niwc_: 1niw C: [80538]
      complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
      complexed with ca, edo, so4
    3. 1997162Domain d1niwe_: 1niw E: [80539]
      complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
      complexed with ca, edo, so4
    4. 1997163Domain d1niwg_: 1niw G: [80540]
      complexed with an endothelial nitric oxide synthase peptide, chains B, D, F and H
      complexed with ca, edo, so4
  3. Domain(s) for 1qx5:
    1. 1997169Domain d1qx5b_: 1qx5 B: [104628]
      apocalmodulin; oligomer with swapped EF-hand units
    2. 1997170Domain d1qx5d_: 1qx5 D: [104629]
      apocalmodulin; oligomer with swapped EF-hand units
    3. 1997171Domain d1qx5i_: 1qx5 I: [104630]
      apocalmodulin; oligomer with swapped EF-hand units
    4. 1997172Domain d1qx5j_: 1qx5 J: [104631]
      apocalmodulin; oligomer with swapped EF-hand units
    5. 1997173Domain d1qx5k_: 1qx5 K: [104632]
      apocalmodulin; oligomer with swapped EF-hand units
    6. 1997174Domain d1qx5r_: 1qx5 R: [104633]
      apocalmodulin; oligomer with swapped EF-hand units
    7. 1997175Domain d1qx5t_: 1qx5 T: [104634]
      apocalmodulin; oligomer with swapped EF-hand units
    8. 1997176Domain d1qx5y_: 1qx5 Y: [104635]
      apocalmodulin; oligomer with swapped EF-hand units
  4. Domain(s) for 1qx7:
    1. 1997177Domain d1qx7a_: 1qx7 A: [104636]
      apocalmodulin; oligomer with swapped EF-hand units
    2. 1997178Domain d1qx7b_: 1qx7 B: [104637]
      apocalmodulin; oligomer with swapped EF-hand units
    3. 1997179Domain d1qx7i_: 1qx7 I: [104638]
      apocalmodulin; oligomer with swapped EF-hand units
    4. 1997180Domain d1qx7m_: 1qx7 M: [104639]
      apocalmodulin; oligomer with swapped EF-hand units
    5. 1997181Domain d1qx7r_: 1qx7 R: [104640]
      apocalmodulin; oligomer with swapped EF-hand units
  5. Domain(s) for 2hqw:
  6. Domain(s) for 2mgu:
  7. Domain(s) for 2pq3:
  8. Domain(s) for 2ygg:
  9. Domain(s) for 3b32:
  10. Domain(s) for 3bxk:
    1. 1997167Domain d3bxka_: 3bxk A: [155716]
      automated match to d1cfca_
      complexed with ca, so4
    2. 1997168Domain d3bxkc_: 3bxk C: [155717]
      automated match to d1cfca_
      complexed with ca, so4
  11. Domain(s) for 3bxl:
  12. Domain(s) for 3sjq:
    1. 1997156Domain d3sjqa_: 3sjq A: [200671]
      Other proteins in same PDB: d3sjqc1, d3sjqc2, d3sjqd1, d3sjqd2
      automated match to d1wrza_
      complexed with ca, gol, phu, so4
    2. 1997157Domain d3sjqb_: 3sjq B: [200672]
      Other proteins in same PDB: d3sjqc1, d3sjqc2, d3sjqd1, d3sjqd2
      automated match to d1wrza_
      complexed with ca, gol, phu, so4
  13. Domain(s) for 4g27:
  14. Domain(s) for 4g28:
  15. Domain(s) for 4j9y:
  16. Domain(s) for 4j9z:
  17. Domain(s) for 4qnh:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from a.39.1.5 Calmodulin

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from a.39.1.5 Calmodulin: