SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family a.25.1.6: PMT1231-like

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990501Family a.25.1.6: PMT1231-like [158402] (2 protein domains)
    PfamB PB016165
    automatically mapped to Pfam PF11266

Protein Domains:

  1. 1990502Hypothetical protein PMT1231 [158403] (1 species)
  2. 1990512automated matches [261918] (4 species)
    not a true protein
    1. 1990513Species Synechococcus elongatus [TaxId:1140] [261919] (5 PDB entries)
    2. 2269021Species Synechocystis sp. [TaxId:1111708] [312327] (1 PDB entry)
    3. 2278920Species Oscillatoria sp. [TaxId:1159] [322221] (1 PDB entry)
    4. 2287742Species Limnothrix sp. [TaxId:1162714] [331043] (1 PDB entry)

More info for Family a.25.1.6: PMT1231-like

Timeline for Family a.25.1.6: PMT1231-like: