Lineage for d3dvga2 (3dvg A:110-214)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 781543Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 783929Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 786045Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (5 species)
  7. 786055Species Human (Homo sapiens) [TaxId:9606] [88569] (132 PDB entries)
    SQ NA # humanized antibody
    Uniprot P01834 # KAC_HUMAN Ig kappa chain C region
    SQ P01834 # KAC_HUMAN Ig kappa chain C region.
    SQ NA # engineered antibody
    including humanized antibodies (chimeric proteins with human constant domains)
    SQ NA # humanized antibody ! Uniprot P01834 # KAC_HUMAN Ig kappa chain C region ! SQ P01834 # KAC_HUMAN Ig kappa chain C region. ! SQ NA # engineered antibody
  8. 786179Domain d3dvga2: 3dvg A:110-214 [157889]
    Other proteins in same PDB: d3dvga1, d3dvgb1, d3dvgb2, d3dvgx1, d3dvgy1
    automatically matched to d1g9ml2
    mutant

Details for d3dvga2

PDB Entry: 3dvg (more details), 2.6 Å

PDB Description: Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin
PDB Compounds: (A:) Human IgG1 fab fragment light chain

SCOP Domain Sequences for d3dvga2:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dvga2 b.1.1.2 (A:110-214) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrg

SCOP Domain Coordinates for d3dvga2:

Click to download the PDB-style file with coordinates for d3dvga2.
(The format of our PDB-style files is described here.)

Timeline for d3dvga2: