Lineage for d3dtub1 (3dtu B:130-281)

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 940170Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 940171Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 940642Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II [49541] (2 proteins)
  6. 940643Protein Cytochrome c oxidase [49544] (4 species)
  7. 940677Species Rhodobacter sphaeroides [TaxId:1063] [74870] (4 PDB entries)
  8. 940678Domain d3dtub1: 3dtu B:130-281 [157857]
    Other proteins in same PDB: d3dtua_, d3dtub2, d3dtuc_, d3dtud2
    automatically matched to d1m56b1
    complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd

Details for d3dtub1

PDB Entry: 3dtu (more details), 2.15 Å

PDB Description: catalytic core subunits (i and ii) of cytochrome c oxidase from rhodobacter sphaeroides complexed with deoxycholic acid
PDB Compounds: (B:) Cytochrome c oxidase subunit 2

SCOPe Domain Sequences for d3dtub1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dtub1 b.6.1.2 (B:130-281) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]}
peadvtvkvtgyqwywgyeypdeeisfesymigspatggdnrmspeveqqlieagysrde
fllatdtamvvpvnktvvvqvtgadvihswtvpafgvkqdavpgrlaqlwfraeregiff
gqcselcgishaympitvkvvseeayaawleq

SCOPe Domain Coordinates for d3dtub1:

Click to download the PDB-style file with coordinates for d3dtub1.
(The format of our PDB-style files is described here.)

Timeline for d3dtub1: