Lineage for d3dggc1 (3dgg C:3-107)

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 929299Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 929300Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 929301Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 931241Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 931270Species Human (Homo sapiens), cluster 3.1 [TaxId:9606] [88537] (2 PDB entries)
  8. 931273Domain d3dggc1: 3dgg C:3-107 [157717]
    Other proteins in same PDB: d3dgga2, d3dggb1, d3dggc2, d3dggd1
    automatically matched to d1aqkl1
    complexed with mg

Details for d3dggc1

PDB Entry: 3dgg (more details), 2.3 Å

PDB Description: crystal structure of fabox108
PDB Compounds: (C:) FabOX108 Light Chain Fragment

SCOPe Domain Sequences for d3dggc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dggc1 b.1.1.1 (C:3-107) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 3.1 [TaxId: 9606]}
vltqspaslavslgqratiscrasksvstsgysymhwyqqkpgqppklliylasnlesgv
parfsgsgsgtdftlnihpveeedaatyycqhsrelltfgagtkl

SCOPe Domain Coordinates for d3dggc1:

Click to download the PDB-style file with coordinates for d3dggc1.
(The format of our PDB-style files is described here.)

Timeline for d3dggc1: