SCOPe 2.01: Domain d3df4w1: 3df4 W:6-84

Lineage for d3df4w1 (3df4 W:6-84)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.84: Barrel-sandwich hybrid [51229] (4 superfamilies)
   sandwich of half-barrel shaped beta-sheets

4. Superfamily b.84.4: Ribosomal L27 protein-like [110324] (2 families)
   rudiment single hybrid fold with a permuted topology

5. Family b.84.4.1: Ribosomal L27 protein [110325] (1 protein)
   Pfam PF01016

6. Protein Ribosomal protein L27 [110326] (3 species)

7. Species Escherichia coli [TaxId:562] [159322] (29 PDB entries)
   Uniprot P0A7L8 1-84

8. Domain d3df4w1: 3df4 W:6-84 [157706]
   Other proteins in same PDB: d3df401, d3df411, d3df431, d3df441, d3df4c1, d3df4c2, d3df4d1, d3df4e1, d3df4f1, d3df4g1, d3df4g2, d3df4h1, d3df4h2, d3df4i1, d3df4i2, d3df4j1, d3df4k1, d3df4l1, d3df4m1, d3df4n1, d3df4o1, d3df4p1, d3df4q1, d3df4r1, d3df4s1, d3df4t1, d3df4u1, d3df4v1, d3df4x1, d3df4y1, d3df4z1
   automatically matched to 2AW4 W:1-84
   protein/RNA complex; complexed with mg, zn

Details for d3df4w1

PDB Entry: 3df4, 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes.

PDB Compounds: (W:) 50S ribosomal protein L27

SCOPe Domain Sequences for d3df4w1:

Sequence; same for both SEQRES and ATOM records:

>d3df4w1 b.84.4.1 (W:6-84) Ribosomal protein L27 {Escherichia coli [TaxId: 562]}
ggstrngrdseakrlgvkrfggesvlagsiivrqrgtkfhaganvgcgrdhtlfakadgk
vkfevkgpknrkfisieae

Timeline for d3df4w1:

• d3df4w1 first appeared in SCOP 1.75
  
• d3df4w1 appears in SCOPe 2.02
  
• d3df4w1 appears in the current release, SCOPe 2.08