SCOPe 2.02: Domain d3dcgd_: 3dcg D:

Lineage for d3dcgd_ (3dcg D:)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.42: POZ domain [54694] (1 superfamily)
   core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143

4. Superfamily d.42.1: POZ domain [54695] (3 families)

5. Family d.42.1.1: BTB/POZ domain [54696] (5 proteins)

6. Protein Elongin C [54699] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54700] (9 PDB entries)

8. Domain d3dcgd_: 3dcg D: [157537]
   Other proteins in same PDB: d3dcga_, d3dcgc_
   automated match to d1lm8c_
   protein/RNA complex

Details for d3dcgd_

PDB Entry: 3dcg, 2.4 Å

PDB Description: Crystal Structure of the HIV Vif BC-box in Complex with Human ElonginB and ElonginC

PDB Compounds: (D:) Transcription elongation factor B polypeptide 1

SCOPe Domain Sequences for d3dcgd_:

Sequence, based on SEQRES records:

>d3dcgd_ d.42.1.1 (D:) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlsgpgqfaenetnevnfreipshvlskvcmy
ftykvrytnssteipefpiapeialellmaanfldc

Sequence, based on observed residues (ATOM records):

>d3dcgd_ d.42.1.1 (D:) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlsnevnfreipshvlskvcmyftykvrytns
steipefpiapeialellmaanfldc

Timeline for d3dcgd_:

• d3dcgd_ first appeared in SCOP 1.75, called d3dcgd1
  
• d3dcgd_ appears in SCOPe 2.01
  
• d3dcgd_ appears in SCOPe 2.03
  
• d3dcgd_ appears in the current release, SCOPe 2.08