SCOPe 2.06: Domain d3d38h1: 3d38 H:37-258

Lineage for d3d38h1 (3d38 H:37-258)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.41: PRC-barrel domain [50345] (1 superfamily)
   core: barrel, partly opened; n*=5, S*=8; meander

4. Superfamily b.41.1: PRC-barrel domain [50346] (5 families)

5. Family b.41.1.1: Photosynthetic reaction centre, H-chain, cytoplasmic domain [50347] (2 proteins)

6. Protein Photosynthetic reaction centre [50348] (4 species)

7. Species Rhodopseudomonas viridis [TaxId:1079] [50349] (19 PDB entries)

8. Domain d3d38h1: 3d38 H:37-258 [157274]
   Other proteins in same PDB: d3d38c1, d3d38h2, d3d38l1, d3d38m1
   automatically matched to d1dxrh1
   complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, uq1

Details for d3d38h1

PDB Entry: 3d38, 3.21 Å

PDB Description: Crystal structure of new trigonal form of photosynthetic reaction center from Blastochloris viridis. Crystals grown in microfluidics by detergent capture.

PDB Compounds: (H:) reaction center protein h chain

SCOPe Domain Sequences for d3d38h1:

Sequence, based on SEQRES records:

>d3d38h1 b.41.1.1 (H:37-258) Photosynthetic reaction centre {Rhodopseudomonas viridis [TaxId: 1079]}
rregyplveplglvklapedgqvyelpypktfvlphggtvtvprrrpetrelklaqtdgf
egaplqptgnplvdavgpasyaeraevvdatvdgkakivplrvatdfsiaegdvdprglp
vvaadgveagtvtdlwvdrsehyfrylelsvagsartaliplgfcdvkkdkivvtsilse
qfanvprlqsrdqitlreedkvsayyaggllyatperaesll

Sequence, based on observed residues (ATOM records):

>d3d38h1 b.41.1.1 (H:37-258) Photosynthetic reaction centre {Rhodopseudomonas viridis [TaxId: 1079]}
rregyplvepedgqvyelpypktfvlphggtvtvprrrpetrelklaqtdgfegaplqpt
gnplvdavgpasyaeraevvdatvdgkakivplrvatdfsiaegdvdprglpvvaadgve
agtvtdlwvdrsehyfrylelsvagsartaliplgfcdvkkdkivvtsilseqfanvprl
qsrdqitlreedkvsayyaggllyatperaesll

Timeline for d3d38h1:

• d3d38h1 first appeared in SCOP 1.75
  
• d3d38h1 appears in SCOPe 2.05
  
• d3d38h1 appears in SCOPe 2.07
  
• d3d38h1 appears in the current release, SCOPe 2.08