SCOPe 2.03: Domain d3d29v_: 3d29 V:

Lineage for d3d29v_ (3d29 V:)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein Proteasome beta subunit (catalytic) [56252] (5 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (50 PDB entries)
   The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)

8. Domain d3d29v_: 3d29 V: [157240]
   Other proteins in same PDB: d3d29a_, d3d29b_, d3d29c_, d3d29e_, d3d29f_, d3d29g_, d3d29o_, d3d29p_, d3d29q_, d3d29s_, d3d29t_, d3d29u_
   automated match to d1g0uh_
   complexed with feb

Details for d3d29v_

PDB Entry: 3d29, 2.6 Å

PDB Description: proteasome inhibition by fellutamide b

PDB Compounds: (V:) Proteasome component PUP1 precursor

SCOPe Domain Sequences for d3d29v_:

Sequence; same for both SEQRES and ATOM records:

>d3d29v_ d.153.1.4 (V:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
ttivgvkfnngvviaadtrstqgpivadkncaklhrispkiwcagagtaadteavtqlig
snielhslytsreprvvsalqmlkqhlfkyqghigaylivagvdptgshlfsihahgstd
vgyylslgsgslaamavleshwkqdltkeeaiklasdaiqagiwndlgsgsnvdvcvmei
gkdaeylrnyltpnvreekqksykfprgttavlkesivnicd

Timeline for d3d29v_:

• d3d29v_ first appeared in SCOP 1.75, called d3d29v1
  
• d3d29v_ appears in SCOPe 2.02
  
• d3d29v_ appears in SCOPe 2.04
  
• d3d29v_ appears in the current release, SCOPe 2.08