SCOPe 2.08: Domain d3d1ka_: 3d1k A:

Lineage for d3d1ka_ (3d1k A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.1: Globin-like [46457] (2 superfamilies)
   core: 6 helices; folded leaf, partly opened

4. Superfamily a.1.1: Globin-like [46458] (5 families)

5. Family a.1.1.2: Globins [46463] (27 proteins)
   Heme-binding protein

6. Protein Hemoglobin, alpha-chain [46486] (24 species)

7. Species Antarctic fish (Trematomus newnesi) [TaxId:35730] [46497] (7 PDB entries)

8. Domain d3d1ka_: 3d1k A: [157208]
   Other proteins in same PDB: d3d1kb_
   automated match to d1la6a_
   complexed with ace, cmo, hem

Details for d3d1ka_

PDB Entry: 3d1k, 1.25 Å

PDB Description: R/T intermediate quaternary structure of an antarctic fish hemoglobin in an alpha(CO)-beta(pentacoordinate) state

PDB Compounds: (A:) Hemoglobin subunit alpha-1

SCOPe Domain Sequences for d3d1ka_:

Sequence; same for both SEQRES and ATOM records:

>d3d1ka_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
slsdkdkaavralwskigkssdaigndalsrmivvypqtkiyfshwpdvtpgspnikahg
kkvmggialavskiddlktglmelseqhayklrvdpsnfkilnhcilvvistmfpkeftp
eahvsldkflsgvalalaeryr

Timeline for d3d1ka_:

• d3d1ka_ first appeared in SCOP 1.75, called d3d1ka1
  
• d3d1ka_ appears in SCOPe 2.07