SCOPe 2.08: Domain d3cmmd_: 3cmm D:

Lineage for d3cmmd_ (3cmm D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId:4932] [89830] (14 PDB entries)

8. Domain d3cmmd_: 3cmm D: [156834]
   automated match to d1otrb_
   protein/DNA complex; complexed with pro

Details for d3cmmd_

PDB Entry: 3cmm, 2.7 Å

PDB Description: crystal structure of the uba1-ubiquitin complex

PDB Compounds: (D:) Ubiquitin

SCOPe Domain Sequences for d3cmmd_:

Sequence; same for both SEQRES and ATOM records:

>d3cmmd_ d.15.1.1 (D:) Ubiquitin {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
mqifvktltgktitlevessdtidnvkskiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d3cmmd_:

• d3cmmd_ first appeared in SCOP 1.75, called d3cmmd1
  
• d3cmmd_ appears in SCOPe 2.07