SCOPe 2.04: Domain d3cmmb_: 3cmm B:

Lineage for d3cmmb_ (3cmm B:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (7 species)

7. Species Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId:4932] [89830] (9 PDB entries)

8. Domain d3cmmb_: 3cmm B: [156833]
   automated match to d1otrb_
   protein/DNA complex; complexed with pro

Details for d3cmmb_

PDB Entry: 3cmm, 2.7 Å

PDB Description: crystal structure of the uba1-ubiquitin complex

PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d3cmmb_:

Sequence; same for both SEQRES and ATOM records:

>d3cmmb_ d.15.1.1 (B:) Ubiquitin {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
mqifvktltgktitlevessdtidnvkskiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d3cmmb_:

• d3cmmb_ first appeared in SCOP 1.75, called d3cmmb1
  
• d3cmmb_ appears in SCOPe 2.03
  
• d3cmmb_ appears in SCOPe 2.05
  
• d3cmmb_ appears in the current release, SCOPe 2.08